Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157374762

GI number:

Start: 1937004

End: 1938938

Strand: Reverse

Name: Not Available

Synonym: Ssed_1623

Alternate gene names: NA

Gene position: NA

Preceding gene: 157374763

Following gene: 157374761

Centisome position: NA

GC content: NA

Gene sequence:

>1935_bases
ATGTTACATTTCTTACGCCCTGAATGGTTCCTTGCCCTGCTTCCACTCGTGATAATCATGTGGCTTTTATGGCGAACCGA
ACAGGCAAACTCGACCTGGAATCGATATATCTCTCCGCATCTGGCGGCATTACTGGTAACAAAAACAAAAAATGTTAAGC
GTCCCTCACTCTCGTATCTGGCTGTTAGCTGGTTGATCGCGGTTTTTGCGCTTTCCGGACCCGCCTTTACTCAACAATCA
CTCCCGGTGTTTGAAGCCGCTCAGGGGCGAGTGATCGTCATGGATATGTCACTGTCGATGTACGCGACGGATCAAGCGCC
TAACCGACTGTCTCAAGCTAAGTTTAAGGCGACAGACTTGATAGGTGAGCTAACAGAGGGGGAGACAGGACTCGTCGCCT
ATGCGGGCGATGCCTATACCATCAGTCCGCTAACCCGTGACAGGTCAACCTTGCTGAATCTCTTACCTACCCTCTCCCCG
GATATTATGCCGTCCAGGGGCTCAAACCTCGTCGCTGCATTAGAGCAAAGCAAAAACCTGCTGGCTCAAGGTGGTCACAT
TCGTGGGGATATCCTACTGCTATCAGACGGCATACCTCCACGGCAGCTCAATGAAGCCAAGAAAGTCCTTAAAGGCACAC
AATATCGGCTCGGGATCTTAGCATTTGGAAGCGAGCAAGGCTCTCCTATCCGATTACCCGATGGCCAGTTACTTCGGGAT
AATGCTAATCAGGTGGTTGTGGCGAAAACAAACTACCTGCAGCTCAATGAACTCGCTCAAGAGGCCGATGGCATATTGAT
CCCCTTTCGCACCGATGGTCAAGATCTAGAGCAATTGCTTACCTGGCTTTCCACCACTGGCGAGACGAAAGCAACAGAAC
TCGATGGTGAGGTCTGGCAAGATGCCGGACCATTCATCGCTTTGTTGCTGCTTATTCCCGTCCTGTTAAGTTTCAGACAT
GGGTTAGTTTGCGCCGCACTCGTCTGCATTATCTATCAACCAACCCCAGCCCTTGCTTCAAGCTGGGACGATGTATGGCA
AACTAAGAACCAACAGGGGATGGAGGCCTATCAGGCTCAGGAATATCAAGGTGCGTCTGAAAAATTCAGTGACCCTCAAT
GGCAAGCCAGTGCACACTACAAGGCTGGCGATTATGATGAAGCCTTAGCCCTATTTGAACAAGATGAGAGTGCAGCAGGC
CTTTATAATCAAGGGAATGCCCTGATGCAACAGGGTAAATATGACGAAGCTATCAAGCGATACGAGCGTGCCGTCAAGAA
AAACCCTGAGCTTAAAGATGCACAAGAGAACTTGGAGTTAGCTAAAAAGTTAGAAGAACAGAAGCAGGAGTCATCGGAAC
AGGATGAAGACTCTGGTCAGGGAGATCCCTCTGACAAAGATGAGAACTCAGACAAAGAGAAAGAGTCGAAACAGGAGAAA
GGTTCTGATAAGGGGGATGGCTCTGAACAGGAGAACAAACCTGGGCAAGATGAAAACTCAGAGCAAGGTAATAACGCTAA
TCAAGACGAGCAATCGGATCAAGAGCAACAAGCTTCAGACCCCGCTTCGCAGGAAAATAGTAATGAATCTGAAATGCAGG
CCGATCCCGACAAGAAAGAGGCTGAAAAGCCCGAAGGTGAAGAGACTCAGCAATCATCTGACTCGGTAGAGCAAAACGCT
GAGAGTGCCGAAAAGGAACAATCTAAAGCTGCGCAAGCCCAAGCAGAGATGGGCGAAGAGGGTCAGGAACAATCTACAGA
TGAGGCAACGGCTGCTCAGCAGGCGCAAACTCAGGATGAACTTCCACCTGAGATGGAGCGCGCATTAAGGGCATTAGCCG
ACGATCCCCAAGTTTTGCTTCGCAATAAAATGCAGCTGGAATATCAGAAACGTCGCAGACAAGGTATGTCTTCGCAGGAA
CAAGAACAATGGTAA

Upstream 100 bases:

>100_bases
ACCTCCCTCTTGCTACGGCCCTGCTAGTCAGTTTTTTTATGGCCTTATCGCAACTCTCACTCTTTAAACGACTCAGCATC
AGATGGGGTAAACGCTAAAC

Downstream 100 bases:

>100_bases
AGGTCTTCAACCAGCCATGCTTTGTAAAATTGGTATATCAAAACGACTTTAACCAAAATTTTTCTTCAAAGGATCTCGAA
TCGTGGTAATACGACAACTC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>644_residues
MLHFLRPEWFLALLPLVIIMWLLWRTEQANSTWNRYISPHLAALLVTKTKNVKRPSLSYLAVSWLIAVFALSGPAFTQQS
LPVFEAAQGRVIVMDMSLSMYATDQAPNRLSQAKFKATDLIGELTEGETGLVAYAGDAYTISPLTRDRSTLLNLLPTLSP
DIMPSRGSNLVAALEQSKNLLAQGGHIRGDILLLSDGIPPRQLNEAKKVLKGTQYRLGILAFGSEQGSPIRLPDGQLLRD
NANQVVVAKTNYLQLNELAQEADGILIPFRTDGQDLEQLLTWLSTTGETKATELDGEVWQDAGPFIALLLLIPVLLSFRH
GLVCAALVCIIYQPTPALASSWDDVWQTKNQQGMEAYQAQEYQGASEKFSDPQWQASAHYKAGDYDEALALFEQDESAAG
LYNQGNALMQQGKYDEAIKRYERAVKKNPELKDAQENLELAKKLEEQKQESSEQDEDSGQGDPSDKDENSDKEKESKQEK
GSDKGDGSEQENKPGQDENSEQGNNANQDEQSDQEQQASDPASQENSNESEMQADPDKKEAEKPEGEETQQSSDSVEQNA
ESAEKEQSKAAQAQAEMGEEGQEQSTDEATAAQQAQTQDELPPEMERALRALADDPQVLLRNKMQLEYQKRRRQGMSSQE
QEQW

Sequences:
NA

Specific function: NA

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA