| Definition | Shewanella sediminis HAW-EB3, complete genome. |
|---|---|
| Accession | NC_009831 |
| Length | 5,517,674 |
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Identifier: 157374307
GI number:
Start: 1388645
End: 1390633
Strand: Reverse
Name: Not Available
Synonym: Ssed_1168
Alternate gene names: NA
Gene position: NA
Preceding gene: 157374308
Following gene: 157374296
Centisome position: NA
GC content: NA
Gene sequence:
>1989_bases ATGAACAAACCACAGCCTTTGAACCATACACGTGAGCAGATAACCGCATTAGACAAAGATCTGTTGGCTCTTCTGGCTAA GCGGCGCGAATTAAGCCTCGATGTTGCTCGCAGTAAAGAGGTCGATATTCGGCCAATAAGAGATACTCAAAGAGAGAAAG AGTTGCTGGCCAGACTCGTCAAACAAGGGCGGGAACAGGGGTTAGATGCACACTATGTCATCTCTCTCTATCAGAGTATT ATCGAAGACTCAGTGCTTAACCAACAGGCTTATCTTCAGGGCCGTGCAAACCCGGACACTCAGAAGCAGCAATACTGTGT GGCTTACCTTGGCGCCAGGGGGTCCTATTCATATCTTGCTGCCAACCGCTACTGCGATCGCCGTCAGGTTGACATGCAAG ACCTAGGCTGTAAAAGCTTCGATGAGATTGTACAGGCGGTAGAGTCCGGCCACGCCGACTATGGTTTTCTGCCTATAGAA AACACATCATCGGGATCGATCAATGAAGTTTATGATGTACTTCAGCATACGAGTTTAGCCATCGTTGGTGAGACCACCAT TGAAGTTGGTCACTGCCTTTTGGCCAAATCGAGTGGTAATGTCAGTAAAATCAAAACGGTATATGCTCACCCTCAACCCA TTAGTCAATGTAGCCGCTACCTAAGCCTGCATCCGGAATTTAAACTTGAGTATTGCTCCAGCAGTGCAGAGGCGATGGAA AAGGTCATAGAAAGTGATGACCCGACAGTCGCAGCCATTGGAAGCGCCGAAGGGGGCGCACTCTATCAATTAGAAGCGAT TGCCCAGGACTTAGCTAACCAAAAGATTAACCAAAGCCGTTTCATTGTCGTAGCCAGAAAAGCCATAGCCGTACCCGAGC AGCTTCCGGCGAAATCAACACTTATCATGGCGACTGGACAGAAACCGGGTGCCTTGGTGGAAGCCTTGCTGGTGCTTAAA GCCCATAACCTGAATATGAGTAAACTCGAGTCACGCCCTATTCCCGGTACCCCATGGGAGGAGATGTTTTATCTGGATCT CGATGCGAACCTTTCCAGTGAATCGATGCAGTCCGCATTAAAAGAGCTTGAACGTATCACTCGCTTCATCAAAGTATTAG GTTGTTACCCTTGCGAAACGGTTAGCCCAACTCAGCTTTCAAATAGTCAGCTGATGATTGAGCCCGATACCAGCCGCGCC GAACATGCCGGCGATTCAACAGAGCAATCCCCTATCGCTACAAACAAACAGGTGAGATATTGCAAAAAGTATAATCAAGA CGCGACCCAAATCACCAGTGGTCAATTGCAAGTTGGGGATAAGCAGTTTGGCGCAATCGCGTTAATCTCATTACCACAAG ATAATGCCCTCTACAGCCAGAAGGCCAAATCAATAAAAGAGGCTGGATTTCAGGCAGTTGTGCTGGAAGGTTTATCACGA CAACAAGATGCAACGGCCAATGTTCTCGAGTTTAAAAAAGCGCTACATCAATTTGACCTCGAATGCATACTTTCTATCGA ACATGAGGCCGAATTAAAACTTGCAACGGAGCATGGCAACATTTTACTTGTAACGGGAAAGCAGATGAATAATCTGGCGC TGCTTAAACGTATTGGATCCTTACATATTCCCGTGATTTTAGAGCGAAACACCATGGCGAGTGTAGAAGAGTTCTTAGGG GCTGCCGAGAGTATTTTGGAACAAGGGAATCAGCAAGTTATCCTGTGTGAATCGGGTGTCAGAACCTTTAATGATTCGGT TATGCCATCTCTGGACTTAGCCGCCTTAGTGGACATCAAAGCGATAAGCCACTTACCGATACTCGTTAACCCAAGTTATG CATCCACTGCTGAGACTCTCTCTTCACACGCTAAAGCGGCAAAACAGCTTAACGCCGATGGTTTGGTCCTTAACTTCTCA TCTGTTGCTGACACCTTTACAGATGAACTAACCACTAACGGTGACATTCTCAGAAGCCTATACCAGTAA
Upstream 100 bases:
>100_bases GGAGGCGGAGTTTCGGTGTAAAAACGAAAGTGAAAATTCCAAAGCCTCCCACTAGGGAGGCTTTTTTGTAACAAAATTTG GTTAAGATATTGAGGACAGC
Downstream 100 bases:
>100_bases AAAACAGGCATAAAAAAGAGGACTGCTTAGTCCTCTCTTTTAATACATCTTAAGATCTAAATGGCAACACCATCGGTTAA GTTCAACCAACCTTTCAATA
Product: chorismate mutase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>662_residues MNKPQPLNHTREQITALDKDLLALLAKRRELSLDVARSKEVDIRPIRDTQREKELLARLVKQGREQGLDAHYVISLYQSI IEDSVLNQQAYLQGRANPDTQKQQYCVAYLGARGSYSYLAANRYCDRRQVDMQDLGCKSFDEIVQAVESGHADYGFLPIE NTSSGSINEVYDVLQHTSLAIVGETTIEVGHCLLAKSSGNVSKIKTVYAHPQPISQCSRYLSLHPEFKLEYCSSSAEAME KVIESDDPTVAAIGSAEGGALYQLEAIAQDLANQKINQSRFIVVARKAIAVPEQLPAKSTLIMATGQKPGALVEALLVLK AHNLNMSKLESRPIPGTPWEEMFYLDLDANLSSESMQSALKELERITRFIKVLGCYPCETVSPTQLSNSQLMIEPDTSRA EHAGDSTEQSPIATNKQVRYCKKYNQDATQITSGQLQVGDKQFGAIALISLPQDNALYSQKAKSIKEAGFQAVVLEGLSR QQDATANVLEFKKALHQFDLECILSIEHEAELKLATEHGNILLVTGKQMNNLALLKRIGSLHIPVILERNTMASVEEFLG AAESILEQGNQQVILCESGVRTFNDSVMPSLDLAALVDIKAISHLPILVNPSYASTAETLSSHAKAAKQLNADGLVLNFS SVADTFTDELTTNGDILRSLYQ
Sequences:
NA
Specific function: NA
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA