Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157374173

GI number:

Start: 1229557

End: 1232217

Strand: Reverse

Name: Not Available

Synonym: Ssed_1034

Alternate gene names: NA

Gene position: NA

Preceding gene: 157374174

Following gene: 157374172

Centisome position: NA

GC content: NA

Gene sequence:

>2661_bases
ATGAAAAAAGTCTTGACGGTTTTGAGTCTCTGTATCGCGACGGCTGTATCATATTCCGCCGTCGCCGGAGTTCAGTCCGG
GAGTCAGTTTAACGAATGGCAAAAGCTTGCTAACAGAGACGATCTCACACGGGTAAATAGCCAGGCTCTTTCCAGTCAAC
AGCTGAGCACAAATATCGCCGCACTGAATCAGATACTGTTGACAAACCGCGACTCGGTCATCATTACCCTGCCTCTACCC
GATGGTAACTTTGCCGACTTTGAGCTCAAACCTTCCGCTATAGTCGAGGGAGGGCTTAATGAAAAGTATCCCAATATTAA
AACCTTCAGTGGTCATGAGTTGGGTAAACCGGACAATCATGGCCGTTTCGATATTACGCCTCAGGGTTTTCATGGTTTAT
TCAGATACGGCAAAGAAACGGTCTTTATCGACCCTCAATATCGCGACAGCGATGCTCGCTATATCAGCTACTTTCGCAAA
GACGCCATCCCGCTGAATCTAGCAAATATGCCCAAACGCTTGCCACCAAAGATCAGAGATAAGAGTCAACAGGCATTCAC
TAGCCATGCCCTCAGAGACGCGGCTATGGTTCCCCAAGCCATGGCTTCCCGAGATAAGGACGCCCAGGCTCAGGCGACTC
AACTGAAGACCTACCGGATAGCCATCTCCGCCACGGGAGAGTACACCCAGTTCCATGGTGGAACCAAGGAGAGGGGTCTT
GCCGCCGTCATCACTATGCTCAATCGGGTCAATGATGTTTATCAGGCCGATCTGGCGGTGAAGTTAGAGCTGGTTGCCAA
TAATGACTCGCTGATTTTTGTCGACCCGAATACCGACCCCTTCGCAAATACCGATGCCGATGGTGAAGCCAACACCGGGA
TCATAGATAATGCGATAGGCAACACCAGTTACGATGTCGGCCATGTGGTCGGAACCGGAGGTGGCGGACTGGCAGCACTC
GGAGTCATCTGTGACGTCACAGCCAAGGGTGACGGAGTAACCGGTAGCCCCAGCCCCACAGGCGATGCGTTTAATATCGA
CTATGTCGCCCATGAGTTAGGTCACCAGTTTGGCGCCGATCATACCTTTAATGGCCTGACCGATTCCTGCGATGGCAACC
GGGCCGACAGCAGTGCTTTTGAGCCGGGAAGTGGTTCTACGGTCATGAGCTATGCGGGGATCTGTGGTCAACAAAACCTA
CAGGATAACTCTAACCCCTATTTCCATTCCCATTCGATTGATGTCATACAGGCCCATATCACCACGGGCACTGGCAGTAG
CTGCGCTCAAGTCGGCACGACGTCGAATACAAATCCAGAGGTCAACGCGGGAGCCGACTATACTATTCCCGCCCGCACTC
CCTTTGTGTTGACGGGTAGCGCAACCGACGCCGATGGCGATCCCCTCTCCTATGACTGGCAACAATATGACTTAGGACCG
GCCAGCGCCAGTGCAGCCGAGCAGGTCGATGACGGTAAACGCCCTCTGTTCAGGGTCTGGAACCCGACCAGTCAACCCAG
TCGCACCTTGCCGAGACTCGAGGATATTCTGCTCAATAAACTGACCATTGGCGAAACCTATCCAACGACGACCCGTGAAC
TCAACTTTCGCTTAATGGTGAGAGATGGTAATCAGGGACTAGCCCGTGACTCGATGAAAATCAGCGTGGTCGACACCAGT
CAAGCCTTCGCCGTTATCGAGCCGGCTGCGGGCAGCAGTTGGGCTAATAACAGTCAGCTCGTTACCTGGAATGTCGCCAA
TACCGCTTCGGCGCCTATCTCATGCAGTAAGGTGAACATTCAGCTTTCAACCAATGGGGGAAGTAGCTTCGATACAGATC
TGGCTATGGGGGTCGACAACGACGGCAGTCACGAGGTCACTCTGACTCAAATAACGTCGAATAGCGCCCGCATTAAACTC
TCCTGCGCCGACAACATATTCTTTGCGGTCAATAACGGCAACTTCTCTGTTGCTGCGGGGACAAACGAGCAGAGTATCGA
GATCACCGCTCTTAAGACTCCCCTCACCATGGATGAGGATGGCGAACTGACATTATCGACCGATATGTACCAGTACCAGG
GACTCACGGCGACCAGCCTTACCCTGCAAGCCGGGAATAACTACCAGGTGAATGGCAACACCATCTCACCGACTGCCGAC
TTTAACGGTGAGTTATCCGTCCTTGTCATCGCTCACAGTGGCAGCATAGAGAGTGAGGCATTCCCGACACTTGTCAGCGT
CACGGCGGTGAACGATGCGCCCAATGCAGTCAATGATGCAAGCAGTGTAAGCCAGGACTCATCGAACAATGTTATCGACC
CCTTAAGCAATGACAGTGATATCGATAGCGGCGATCAACTCAGCCTGTTAAGTCTCAATTATACGGGACAAGGCACAGCC
ACTATCATCAATAACAAGATAAGCTACACCCCGGCAGCAGGCTTTTCTGGCAGTGAAACCATCACTTACACCCTGCAGGA
CTCATCGAAAGCCACTGCCAGTGCAGTCGTCACCATCACAGTTAATGCCACAAACACGGGTACCACAGGGGGCAGTGGAA
GCGAGACGGGTGGTAGTTCATCCGGCGGCGCCTTAGGCTTCTGGTTATTTATCTTACTGCCATTGCTGGGAGCAAGAGGT
TTAAGAGGGAGAGACCTATGA

Upstream 100 bases:

>100_bases
GTTTGTATCAAACGAGGCAAAGCAGCTACAATTTGCCAAGGAAGTTAACACCCTTATTACATTAAGGTGATAACTCTTCA
TTTGGTAAAGGGGAACCACC

Downstream 100 bases:

>100_bases
ACAGAGTCAGCGATCACTTACTCATTGTATTAGCCATATTGTTTATGACGACTCAACTTAGCGGGTGTAACCATACAGAA
GACTCAAACATAGATCCGAC

Product: PPE repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>886_residues
MKKVLTVLSLCIATAVSYSAVAGVQSGSQFNEWQKLANRDDLTRVNSQALSSQQLSTNIAALNQILLTNRDSVIITLPLP
DGNFADFELKPSAIVEGGLNEKYPNIKTFSGHELGKPDNHGRFDITPQGFHGLFRYGKETVFIDPQYRDSDARYISYFRK
DAIPLNLANMPKRLPPKIRDKSQQAFTSHALRDAAMVPQAMASRDKDAQAQATQLKTYRIAISATGEYTQFHGGTKERGL
AAVITMLNRVNDVYQADLAVKLELVANNDSLIFVDPNTDPFANTDADGEANTGIIDNAIGNTSYDVGHVVGTGGGGLAAL
GVICDVTAKGDGVTGSPSPTGDAFNIDYVAHELGHQFGADHTFNGLTDSCDGNRADSSAFEPGSGSTVMSYAGICGQQNL
QDNSNPYFHSHSIDVIQAHITTGTGSSCAQVGTTSNTNPEVNAGADYTIPARTPFVLTGSATDADGDPLSYDWQQYDLGP
ASASAAEQVDDGKRPLFRVWNPTSQPSRTLPRLEDILLNKLTIGETYPTTTRELNFRLMVRDGNQGLARDSMKISVVDTS
QAFAVIEPAAGSSWANNSQLVTWNVANTASAPISCSKVNIQLSTNGGSSFDTDLAMGVDNDGSHEVTLTQITSNSARIKL
SCADNIFFAVNNGNFSVAAGTNEQSIEITALKTPLTMDEDGELTLSTDMYQYQGLTATSLTLQAGNNYQVNGNTISPTAD
FNGELSVLVIAHSGSIESEAFPTLVSVTAVNDAPNAVNDASSVSQDSSNNVIDPLSNDSDIDSGDQLSLLSLNYTGQGTA
TIINNKISYTPAAGFSGSETITYTLQDSSKATASAVVTITVNATNTGTTGGSGSETGGSSSGGALGFWLFILLPLLGARG
LRGRDL

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA