Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157374027

GI number:

Start: 1057205

End: 1060372

Strand: Reverse

Name: Not Available

Synonym: Ssed_0888

Alternate gene names: NA

Gene position: NA

Preceding gene: 157374028

Following gene: 157374026

Centisome position: NA

GC content: NA

Gene sequence:

>3168_bases
ATGGCGCCACAAACAGGGATAATGGCTTGGTTTGCCAGAAATACGGTTGCCGCTAATTTGCTCATGGCTTTCCTGATATT
CGGGGGGCTATTCAGTAGTTTTTTTGTCATCAATAAAGAGATATTTCCCTCTTTTGAACTGAACTATCTGCAAATTTCTG
TTGCCTATCCTGGCGCAGCTCCCCAAGAGATCGAAGAGGGGATCAACATAAAGATTGAGGAATCGATTCAGGATATTGAT
GGCATAAAAAAAGTCACCTCAGTCGCCGGTGAAGGCGTGGGGTCGGTGACGATTGAGGTTCAGGACAGCTATGATCCTCA
AGATATTCTGGATGAAGCAAAACTCAGACTCGATGCCATCTCAACCTTCCCGGATAATATCGAAAAACCTAACATCTTCC
GTATCAAACCAGAAAACAATGTTATCTGGGTCTCTGTCTATGGTGATCTCGACCTGCATGAGATGAAGGAGTTGGCTAAG
AGTATCAGAGAAGATATCACTTCACTGCCTTCGGTAACTCGTGCAAAAGTCACTGGCGTCCGTGATTACGAGATAGGCAT
TGAAGTATCGGAAGATAAACTCAGAGAGTACGGGCTTAGCTTCGCCCAGGTAGCTAAAGCGGTGCAAAGCTCCTCAATCG
ATCTTCCCGGTGGTTCTATTCGGGCACAGGATGGCGACATCCTACTGAGAACCAAAGGTCAGGCGTACACCGGCGAAGAC
TTTTCTAAAATCGTGGTGTCGACCCGAACCGACGGTAGCCGAATTATGCTGCCACAGGTCGCCACGATTAAGGATGATTT
TGAGGAGCGACTGGAGTACACCCGCTTTAACGGAAAACCCGCGGCGATTATCGAAGTCACCAGTATTGACGATCAAAACG
CACTGGATATCTCAGCTGAGGTGAAAGAGTATATCGCCGAGCGTAGTAAGACTCTGCCCGCCTCTGCCAAACTTGATACC
TGGGGCGACCTGACTCATTACCTCAAGGGACGTTTGAACATGATGTTATCCAACATGTTCTACGGCGCCGTGTTGGTATT
TCTGATCCTCGCCCTCTTCCTTGACGTTAAGCTCGCCTTCTGGGTAATGATGGGGTTGCCGGTCTGCTTTTTAGGCACCG
CATTATTAATGCCTATCGAACCGTTTTCGATGTCGATTAACCTATTAACCCTATTCGCCTTCATTCTGGTACTCGGTATC
GTCGTCGATGATGCCATCGTGATAGGAGAGAGTGCCTATAGTGAAACCGAGCGGCATGGCCATTCCCTCGATAATGTCAT
TAAAGGCGCAAAAAAGGTCGCCATGCCAGCCACCTTCGGGGTATTAACCACCATAGCGGCCTTTATTCCCATGTTAATGG
TATCGGGCCCTCAGGGGATCATCTGGAAATCTATTGGGATGATTGTCATCCTCTGTCTGGCCTTCTCCTTGGTAGAATCT
AAGCTGATCTTACCCGCGCACCTGGCTCATATGAAGCCGAAAAAACCGAACCTTAACCCTAATGTCTTTGTGCGTTTTAA
AATTGCACTTAACAATAAGGTCCAGCATTTTATCCACCATAAATATCGCTATTTTTTAGAAACCTGTATCAAGAATAGAT
ATAGCGTTGTAGCCGTCTTTATTGGCGTGCTCATTCTTTCTATCGCACTGGTTGTGAGTGGCACGGTGCGTTGGGTCTTC
TTCCCCGATCTGCCTTCTGACTTTATTCAAGTTCAGCTGGAGATGGAACCTGGCAGCTCTGAAGAGAATACGTTAAAGGT
GGTGAAAGAGATTGAAGATGCGCTCTATACCATGAATCAACAGATAGAGGATGAAGTGGGCTATCCGGTCGTTAAGCACA
GCTTTATCGACATGAGCTCGCGCACCTCAGCCTTCATCTTTGCCGAACTCACCAAAGGAGAAGATCGTGAAGTCGATGGG
GTGAGAATCGCCAACCTCTGGCGTGAAAACATACCTGAACAGCTCTCGGTCAAGAAGCTTAATATCAATGCCAGCACCAA
TGATGCAGGCGCCGATATCTCATTCAGGCTCTCTTCCAGTAATTTAGAGCAGCTAGCGTTAGCCTCCGCCGAGCTTAAGC
AGAAGCTTAAAACCTATGAAGGTATCTATGACATTTCCGATAACTATTCATCGGGAAGCCATGAGATCCGCCTCAATATT
AAACCCGAAGCTGAAGCTCAAGGCCTGACCCTGTCGGATCTAGCCAGCCAGGTTCGCTACGGTTTCTACGGCTTCGAAGC
GCAGAGGATATTGAGAAATAAGGAGGAGGTGAAGGTGATGGTGCGCTATCCGCTCGATCAGCGCCGCTCTGTAGGTCATC
TTGAAAATATGATGATCCGCACCCCCAGTGGGATCTCAGTCCCCTTCTCTACTGTGGCCGAAATTGAACTGGGGGACTCC
TACTCATCGATCACACGTGTCGATGGACGCCGTGCTATATCCATTATCGCCAATGCTGATAAAGATAAGGTAGAGCCATC
TAAAATCGTCGCCGAAATTCAGGAGGAGTTTCTACCCTATTTAGAAGCTCAATACCCACAAATTTCGACAACGTTAGACG
GTGGCAGTGCAGATGAACAGAGTGCACTAATTAGCTTAGTGCAAGGTTTCTTGTTCGCGCTATTTGCCATCTATGCCTTG
ATGGCGATACCGCTTAAATCCTATAGCCAGCCATTGATCATCATGGCCGTGATCCCATTTGGTATCATAGGGGCATTGTT
TGGTCACCTGATCCAGGGCTTGGCACTCAATATCCTCAGTCTATGTGGCATTGTTGCGCTTGCGGGCGTCGTCGTGAATG
ACTCGCTCATCCTGGTCGACTTTGTAAATAAGGCGCGTGCACAGGGGCAATCGATAACCCAAGCAGCCGTTGACTCTGGA
TGCCATCGTTTCCGCGCGATTATCTTAACGTCATTAACGACTTTTGTGGGCCTTGTCCCCATCCTTTTGGAGACCAGTTT
ACAAGCACAGATCGTGATCCCGATGGCAACCTCACTCGCCTTCGGTATCTTGTTCTCTACTGTGGTGACGCTGATTTTGA
TCCCCTTGCTTTATATCGTACTCGACGATGCTAAGCGGCTTTTGTCATGGATAGGGAGAGCACTGCGACGTTTCTATATC
TGGTGGTGGCAACCAAAACCCGCACATAGCCAAGATGATATGGCTTAA

Upstream 100 bases:

>100_bases
AACTAGTCAAAATATTAGGTGAAGCGAGTAAAAATGGCACTAATCTTCCCGAAAGCGATATTGCAAAAGAGCAGCGTTTA
GCCGCGGCGGGTGATCAATA

Downstream 100 bases:

>100_bases
ATTCTCTAAGAAAATAGAGATAGAATAAAAGGGAGGCATAGCCTCCCTTTTTCGATCTGACCGACAGTTTAGTTGCGGGA
GATCCTATAGACTCATCACT

Product: acriflavin resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1055_residues
MAPQTGIMAWFARNTVAANLLMAFLIFGGLFSSFFVINKEIFPSFELNYLQISVAYPGAAPQEIEEGINIKIEESIQDID
GIKKVTSVAGEGVGSVTIEVQDSYDPQDILDEAKLRLDAISTFPDNIEKPNIFRIKPENNVIWVSVYGDLDLHEMKELAK
SIREDITSLPSVTRAKVTGVRDYEIGIEVSEDKLREYGLSFAQVAKAVQSSSIDLPGGSIRAQDGDILLRTKGQAYTGED
FSKIVVSTRTDGSRIMLPQVATIKDDFEERLEYTRFNGKPAAIIEVTSIDDQNALDISAEVKEYIAERSKTLPASAKLDT
WGDLTHYLKGRLNMMLSNMFYGAVLVFLILALFLDVKLAFWVMMGLPVCFLGTALLMPIEPFSMSINLLTLFAFILVLGI
VVDDAIVIGESAYSETERHGHSLDNVIKGAKKVAMPATFGVLTTIAAFIPMLMVSGPQGIIWKSIGMIVILCLAFSLVES
KLILPAHLAHMKPKKPNLNPNVFVRFKIALNNKVQHFIHHKYRYFLETCIKNRYSVVAVFIGVLILSIALVVSGTVRWVF
FPDLPSDFIQVQLEMEPGSSEENTLKVVKEIEDALYTMNQQIEDEVGYPVVKHSFIDMSSRTSAFIFAELTKGEDREVDG
VRIANLWRENIPEQLSVKKLNINASTNDAGADISFRLSSSNLEQLALASAELKQKLKTYEGIYDISDNYSSGSHEIRLNI
KPEAEAQGLTLSDLASQVRYGFYGFEAQRILRNKEEVKVMVRYPLDQRRSVGHLENMMIRTPSGISVPFSTVAEIELGDS
YSSITRVDGRRAISIIANADKDKVEPSKIVAEIQEEFLPYLEAQYPQISTTLDGGSADEQSALISLVQGFLFALFAIYAL
MAIPLKSYSQPLIIMAVIPFGIIGALFGHLIQGLALNILSLCGIVALAGVVVNDSLILVDFVNKARAQGQSITQAAVDSG
CHRFRAIILTSLTTFVGLVPILLETSLQAQIVIPMATSLAFGILFSTVVTLILIPLLYIVLDDAKRLLSWIGRALRRFYI
WWWQPKPAHSQDDMA

Sequences:
NA

Specific function: NA

COG id: COG0841

COG function: function code V; Cation/multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA