Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157373958

GI number:

Start: 973185

End: 977045

Strand: Reverse

Name: Not Available

Synonym: Ssed_0819

Alternate gene names: NA

Gene position: NA

Preceding gene: 157373959

Following gene: 157373954

Centisome position: NA

GC content: NA

Gene sequence:

>3861_bases
GTGAAAACAAAAGTATCTATCGCAGTCACGGCCGCGCTAATTTCGAGTGCCGCCATCGCAAGCAGTGATTTTTCTGCTAA
TAAATATTCTCCTGAGCTAACCTCTGTAAACAACTACAACAAACCACAAACATCGAGTCCATCTCTTGTTGCTCCCCAGC
GTTTTATCGTAGAACTCGAGTCTCCGGCTCTGGCCAAATACAGGGGAGGCATTCAACAGCTAGTTGCAACGGCTCCCGCA
AAGAAAGGTCAAAGAATCGATGTTCAATCGGCCGGTGCGAAGAGTTACGTAAGCCACCTGAGCCAAGAGCAAAATGCATT
TACCAAAGCCCTTTCAAAGAGTGCACCTAATGCGAAAGTTGAGCGTAACTTTAAAACGCTTTTCAACGGTGTGAGTCTTG
TTGCTCAAGGAATGACACTCGAGCAGATTGCCGCAATGCCTGGTGTTAAGTCTGTTTACCCTGAAACCATGTATGAAACC
AACATGGATGCTTCACATGAAATCATCAACGATGCGGCCATGTGGGAAGTGGTTTCAGGCATGGAGAATGCGGGCAAAGA
TATCCGCGTCGCCGTTATCGATACCGGTATTCGTCCTGAAAACCCTATGTTCTCAGGTGAAGGCTTTACTAAGCCTACGG
CAGATATGCCTGCCGATGATTATTGCTCGACGGTAGATACCAGCTTTTGTAATGACAAGCTAATTGTCGCTCGTTGGTCC
CAGCCAACATTTGAAGTTTGTGCCGATGAGCACATGAGCCCGCTTGGATACGGTGGTCACGGTTCACACGTAGCAGGTAC
CTCTGTTGGTAACAAGATCAGCACGACCTATAAAGATGTCGATGTGGATCTCTCTGGTGTCGCTCCCGCCGCATACCTGA
TGGTATATAAGGCACTGTTCACTAAGACCGACTGCTCCCGAGGCAGCGGTAGTAACATCATGCTGATGGAAGCGATGGAG
CATGCGGTTAATGACGGCGCCGATGTTATCAACAACTCATGGGGTGGCGGTGCAGGCGGCGATCCGGCTAACAGCCCGTA
CAAAACCATGTATGAAGCCGCCGAAGCCGCCGGCGTTGTCGTCGTTACCGCCGCAGGTAATGACGGTAATGGCGCACAAA
CTATCGGATGCCCGGCCTGTATCGAGTCAGGGATTACTGTCGCTAACAGCACCACCGGTCGCTTCTTCGCTAACAGCTTT
ACAATGGGTGATGATGAACTGCTCGCCATCGAAGCCAATAACGAGTTGCTAACTGAGGATATCACTTTACCTGTAATTGC
AGCTGTGAATATCGACGCTGACAATTTTGAAGGGTGTGATGCATTCCCGGCAGATTCATTTAAAGATGGTATTGCGTTAA
TTTCACGTGGTGCATGTGCATTTAGTGATAAGACTGCGAATGCGCAGGCCGCCGGTGCTAAGGCCATTGTTGTCTACAAC
AGTAAGCCTGGAGCCCCCATCAGCATGTATATGCCTGATGCTACACTTCCTGGTGTGATGATCTCTGATGCCGATGGCGC
AGCCGTTATCGAAGGTTTAGAAGAGGGCGTTGCTTGTACTATTGGCTCAACAGTTAAGCGTATCGCCAACTCGACTTTAG
CCGATCTTATCAATGCTTCGAGCTCGCGTGGTCCAAACGGTAATCAAAATATCCTTAAGCCAGATCTGGCGGCGCCGGGT
ACTTCGATACTTTCAGCCACCTCTCCCGATGAAGATGGCACTGACTTTACCACTATGACTGGTACAAGTATGGCCAGCCC
TCACGTTGCCGGTGCCGCAGCCCTGATGAGTCAACTGCACCCGGACTGGAGTGCCAATGACATCAAGACAGCGTTAACAT
CGACCTCTCATATGGCGGGTATACTCGATGATGATGCTGAAACGGATGCCAACCCATTTGCTATGGGTGCGGGTCGTATG
GATCTTGATGCGGCAGCTAAAGCTGTCTTAACATTCGATAAGCCATCTGTTGCTTCTGACTCTTGTGTCGGTCCATGTAC
ATTTACCCGTACCGTCTATAACAAGAGCGATGAAACAACTTCATGGTCACTTTCTGCTGCGGCTGACAGCGCCGGGATCA
GCATTTCACCAACCACTCTGGAACTTGAAGCTGGCGCCTCAGCGACATTTACCGTAACCGTCGACTCGACGTTCAGTGAA
TATGGCTCTTGGATCTTCGGCAACGTCATGATCAAGAGTGATGAAGGCAAGCAAGATGCTCACCTGCCACTTGCCGTTAT
GGCGAAAGAGTCGAGTGACGCTTCACTTATCTCAACACTTACTACGCAAGCAGATATCAAGGCAAGCGATGAGTTTCCTA
TCAAAGCCGTTGTTAATAACTCTATCTTCGAAAATACAGTTACCCTAACGGCTAATGCACCACAAGGAACCAAGCTTACC
TCAGAAGATGATGTGACCGTCTCTATTAGCGGTGCAACACAGCACGGTTTCGATATTAATGAAGATCTGGGACGTATTAC
CTGGGTAGGTAAACTCGACTTGCCAGAGATGAGCTCTATCAAGGATGTGGGTGGATTCCCGAGCATTATTGATTTAGGGG
TTTTACCTCAACCATGTGAAAGCGGCTGTGACGAAACGGCGCTGACATTCAACTCTCTTCCCAGCTTTAAATACAACGGC
GTGAGCTATGACAGCATCACCATGGGCGATAATGGTTTAGCCATTGTCGGTGGTGGTTCAACTTCAGGTACCTGGAATAA
CAAAGAGCTACCTGACTCTGCCAACCCAAATAACATCATCGCACCATTCTGGTCTGATTTCGATCTAGCCGATACTTCAG
GTACCGATACCGGTGGTGGAGATATGGCTATCGGGGTATTTACCGGTGGTGACGGCACAACCTGGTTGGCTCTGGAGTGG
AAAGATGCGCAGCTATATGCAGATGAGTCAAATACTAAATATACCTTTAGCATCTGGATAAAAACAGGCGATGAAGAGCT
GGTATTGTTCAACTACATAGATGTACCTAACATGCCTGCAAATCTGACAATCGGAGCCGAGAATATCGGTGGTTCGGTTG
GTACAACCTTCCACTACAATGGGCAAGGTAGTAGTGTAACCAATGGTGACGGCGTCATACTTCAAACATCGACTGCCGGT
AGCGTAAACATTGACTACAAGGTTAAGTCTACCGAATTTAACCCGGGTCAAAGCGACAACGTCTCTGTAGATGAAGAAGC
TACATTAGCGTTTAATGTGCTCGATAATGACATGAAGGACCAAAAAATCGCTCATGTTTCAGTCACCGGTGATGGCATGA
CAGCCGAAGCTTTGCGTTTAATTGATGTGGCTCCTACCGGTGCCCTTGGTAAAGCGATGCTTGTAGATGAGCCATCTAAC
GGTGAAGTAACACTGAAAGAAGACGGTACTGCTGAGTATACTCCTGAAGATGATTTCTTCGGTAAAGACAGCTTTAGCTA
TACCTCTGAAGATGCCGATGGTAATACCGGGAACGCGACTCTGGTAAACATCACAGTAAATAATGTCAACGATGCACCTA
AGGTGAGCCCATCAGGTATGTCCAGCACCGAAGGATTCGCTGTTAAAGCATCGGCCAATGGCAGTGATGTTGATGGTGAT
GATCTGACATACACCTGGACACAAGTAAGCGGCACGAGTGTTGAGTTTACCAATGGCGGCGAAAGTATCGGCTTTACCGC
TCCATCTGGCGATCATGAGCTTGTCTTCTCTGTCGTTGCTTCCGATGGTGAGTTAGAGAGTGAAGCGGGCACGGCAACAA
TCACTGTAAATTCAGTCAAAGAGGACACCTCTGGTGGTTCACTGGGGTGGTTGACTATGCTACTGCTTCCTTTTGCAGGC
CTGCGTCGCCGTAAGCGTTAA

Upstream 100 bases:

>100_bases
CCTTACCTCTCGAAACAGAGAGGGAAAAAATAATAAGTAAACCATTACAGTTGCCTCACGGATATGTACCTAAGGCAGAT
TATTGACAAGGAATGAAGTT

Downstream 100 bases:

>100_bases
TGCAATCGTAAGTTAGACTGTTGAACCGAAAAGGGAGCCTGATGGCTCCCTTTTTATATGTGACTTTTAAAATAATTTAG
CGTTGTTTCAAAATTATATC

Product: peptidase S8/S53 subtilisin kexin sedolisin

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1286_residues
MKTKVSIAVTAALISSAAIASSDFSANKYSPELTSVNNYNKPQTSSPSLVAPQRFIVELESPALAKYRGGIQQLVATAPA
KKGQRIDVQSAGAKSYVSHLSQEQNAFTKALSKSAPNAKVERNFKTLFNGVSLVAQGMTLEQIAAMPGVKSVYPETMYET
NMDASHEIINDAAMWEVVSGMENAGKDIRVAVIDTGIRPENPMFSGEGFTKPTADMPADDYCSTVDTSFCNDKLIVARWS
QPTFEVCADEHMSPLGYGGHGSHVAGTSVGNKISTTYKDVDVDLSGVAPAAYLMVYKALFTKTDCSRGSGSNIMLMEAME
HAVNDGADVINNSWGGGAGGDPANSPYKTMYEAAEAAGVVVVTAAGNDGNGAQTIGCPACIESGITVANSTTGRFFANSF
TMGDDELLAIEANNELLTEDITLPVIAAVNIDADNFEGCDAFPADSFKDGIALISRGACAFSDKTANAQAAGAKAIVVYN
SKPGAPISMYMPDATLPGVMISDADGAAVIEGLEEGVACTIGSTVKRIANSTLADLINASSSRGPNGNQNILKPDLAAPG
TSILSATSPDEDGTDFTTMTGTSMASPHVAGAAALMSQLHPDWSANDIKTALTSTSHMAGILDDDAETDANPFAMGAGRM
DLDAAAKAVLTFDKPSVASDSCVGPCTFTRTVYNKSDETTSWSLSAAADSAGISISPTTLELEAGASATFTVTVDSTFSE
YGSWIFGNVMIKSDEGKQDAHLPLAVMAKESSDASLISTLTTQADIKASDEFPIKAVVNNSIFENTVTLTANAPQGTKLT
SEDDVTVSISGATQHGFDINEDLGRITWVGKLDLPEMSSIKDVGGFPSIIDLGVLPQPCESGCDETALTFNSLPSFKYNG
VSYDSITMGDNGLAIVGGGSTSGTWNNKELPDSANPNNIIAPFWSDFDLADTSGTDTGGGDMAIGVFTGGDGTTWLALEW
KDAQLYADESNTKYTFSIWIKTGDEELVLFNYIDVPNMPANLTIGAENIGGSVGTTFHYNGQGSSVTNGDGVILQTSTAG
SVNIDYKVKSTEFNPGQSDNVSVDEEATLAFNVLDNDMKDQKIAHVSVTGDGMTAEALRLIDVAPTGALGKAMLVDEPSN
GEVTLKEDGTAEYTPEDDFFGKDSFSYTSEDADGNTGNATLVNITVNNVNDAPKVSPSGMSSTEGFAVKASANGSDVDGD
DLTYTWTQVSGTSVEFTNGGESIGFTAPSGDHELVFSVVASDGELESEAGTATITVNSVKEDTSGGSLGWLTMLLLPFAG
LRRRKR

Sequences:
NA

Specific function: NA

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA