Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157373472

GI number:

Start: 383891

End: 385558

Strand: Reverse

Name: Not Available

Synonym: Ssed_0331

Alternate gene names: NA

Gene position: NA

Preceding gene: 157373473

Following gene: 157373471

Centisome position: NA

GC content: NA

Gene sequence:

>1668_bases
ATGGAATCGCTGATGGAATCGACAATTAAAACCCCTGTAGAGATGCTAGCCCATTGGGTCGACAAGCTCGGTAACAACAC
CTACCTGAGACAACCCATCAATGGTCAATATAAAGATTTTAGCTGGGTAGAAGTTCAGCAGAAGATGCAACAGATAGCCG
GTGCACTGAGACACTTAGGGTTAAAGCCCGGTGATAAGGTCGCGGTATTATCGAAAAACTGCGCCGAATGGTTTATTACC
GATCTCGCCCTGATGCATGGGGGGTACATTAGCGTTCCCATCTATCCCACGGCCAACGCAGACACCATACGTTATGTCCT
CGAGCACAGTGAAGCGAAAGCCATCTTTATCGGCAAGCTGGATTATTGGGCCGATCAGGAAGCTGGCGTAGGTGGTGATA
TCCTTAGAATGGCAATGCCCTACGACACTATGCCGGCACAATACCAGTGGGACAGCCTGCTCGAAATGGGCCAACCTCTA
ATCGATGCGCCCTTCGCGACACCGGATCAGACCATGACCCTGATCTACACCTCGGGGTCAACCGGCAAGCCCAAGGGTGC
GATACTGAACTTCGCCAGTTATGGCTGGACCTGTAAGGCTGTGGTCCGGGATCTGAAAACGGACATTGAAGACAGGCTGA
TCTCCTATCTGCCCCTGGCGCATATTACCGAACGCGTTGCGATGGAGGGCTCCTCATTTTATTCCGGCAGCAGCGTCGCA
TTTGTTGAGAGTCTCGATAGTTTTGTCACCGATGTTCAACGCGCAAGACCCACGGTCTTCTTCTCTGTCCCACGGCTGTG
GAGCCTGTTTCAGCAAAACATTATAGAGAAGATCGGCTATAAGAAGCTCAATTTTCTGCTTAAGGTGCCGATCCTCAATA
ATATCGTTAAGAAGAAGATCCATGAGGGTCTGGGGTTAGAGCACTGCCACCTGCTAGGTTCTGGCTCGGCGCCTATTCCA
CCGTCTCTGATCGCCTGGTATCACAAGATAGGACTCAACATCAGTGAAGCATGGGGCATGACAGAGAACAGTGCCTACTC
GATTATCAACTACCCATTCGATCCCGCTAAAATCGGCACAGTCGGCCGCGCAATCGAGGGATGCTCCATTAAACAAACTG
AGTCCGGAGAACTGTTGGTTAAGAGTCCGGGATTGATGACGGGTTACTATAAACAACCTGAGATGACCGCAGCCTGTTTC
GATCCCGATGGTTACTTCCATACCGGCGATCTTTGTGAAATCGACAACGATGGCTGTGTCACCATTACCGGGCGGGTAAA
AGATAACTTTAAAACGTCCAAAGGAAAGTATGTCGCGCCGGTACCTATTGAGCGCAAGCTTGCCCAGGATCCTCATATAG
AGCTGCTCTGTGTCATAGGTTCGGGTCTGCCCCATCCTATAGCCCTGGTACAACTCTCCGAGGGCGCATCACTGCAGCCA
AGAGAGGAGGTACGCACCTCCTTGAAGGCGACGCTGGACAGCATCAACCCTAACCTGGAGTCCCATGAGACCTTAGATGC
AATAATTGTCGTCTCTGAACCATGGGACGTCGATAATGACGTATTAACTCCGACACTGAAGATAAAACGCCATGTGTTAG
AAAAACGTTTCAGTGAAAGAGTAGATGGGATCCGTGGAGGCAAGGTTCGCTGGGAAGAGGAGCTGTAA

Upstream 100 bases:

>100_bases
TAGATCACATTTTTCGCCATACTCAAAGACGTAGTCGAACAGATATCGAACACATATAAAAAGAACTATTCTGTTCGGCC
TGATTTTAACAATAATAATT

Downstream 100 bases:

>100_bases
CCTTTAGCAGCCACTCTTAGTTACCTTATTTAAAGCATGCCATTGGGCATGCTTTTTTGTTATGGGAACCTTCAAAATTA
ACGAAATTTAATCCCCTCAT

Product: AMP-dependent synthetase and ligase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>555_residues
MESLMESTIKTPVEMLAHWVDKLGNNTYLRQPINGQYKDFSWVEVQQKMQQIAGALRHLGLKPGDKVAVLSKNCAEWFIT
DLALMHGGYISVPIYPTANADTIRYVLEHSEAKAIFIGKLDYWADQEAGVGGDILRMAMPYDTMPAQYQWDSLLEMGQPL
IDAPFATPDQTMTLIYTSGSTGKPKGAILNFASYGWTCKAVVRDLKTDIEDRLISYLPLAHITERVAMEGSSFYSGSSVA
FVESLDSFVTDVQRARPTVFFSVPRLWSLFQQNIIEKIGYKKLNFLLKVPILNNIVKKKIHEGLGLEHCHLLGSGSAPIP
PSLIAWYHKIGLNISEAWGMTENSAYSIINYPFDPAKIGTVGRAIEGCSIKQTESGELLVKSPGLMTGYYKQPEMTAACF
DPDGYFHTGDLCEIDNDGCVTITGRVKDNFKTSKGKYVAPVPIERKLAQDPHIELLCVIGSGLPHPIALVQLSEGASLQP
REEVRTSLKATLDSINPNLESHETLDAIIVVSEPWDVDNDVLTPTLKIKRHVLEKRFSERVDGIRGGKVRWEEEL

Sequences:
NA

Specific function: NA

COG id: COG1022

COG function: function code I; Long-chain acyl-CoA synthetases (AMP-forming)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA