| Definition | Shewanella sediminis HAW-EB3, complete genome. |
|---|---|
| Accession | NC_009831 |
| Length | 5,517,674 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 157373367
GI number:
Start: 258306
End: 260015
Strand: Reverse
Name: Not Available
Synonym: Ssed_0226
Alternate gene names: NA
Gene position: NA
Preceding gene: 157373374
Following gene: 157373366
Centisome position: NA
GC content: NA
Gene sequence:
>1710_bases ATGCAAATCGACAAGACAGCAGAGCTAAATCTATTATGGGGCACTCTTATACTCGAGGAGCTCTCTCGCCTAGGGGTTCA ACATGTGTGTATGGCTCCTGGCTCACGCTCGACACCTTTAACTCTCGCCGCCGCAAAACAATCTAAGCTTAAACAGCATC TGCATTTCGATGAGCGCGGGCTTGGATTTATGGCACTGGGTCTTGCAAAAACAAGCCATGCTCCGGTGGCAATTATCACG ACCTCCGGGACCGCTGTCGCGAATCTCTATCCGGCGATAATCGAGGCCTGGCTAACGCAAGTACCTTTGGTAGTCTTGTC CGGAGACAGACCCCCGGAACTGATCGATTGCGGTGCCAATCAGGCCATCATTCAACCGGCGCTCTTTGCACAATATGCCA AGCAGATTAATCTGCCCACACCGGATATAGCTATCCGGCCGGAGGCGCTGCTCACCATGTTAGATGAAGCTATCAGCAAT CAAAGCCTGCCCGTTCATATTAATTGCATGTTTCGTGAGCCACTTTACCCATCGACCATGAGTGCCGACTTTACCCAGTA CCTGAGTACACTGGGTAATTGGCAGCATACGACGTCCCCTTTTAATCAATACGGTAAAACGTCACAGCACAGCCTGCCAA CCCAAGACTCATTGGCCCGCTTTGTTCATGGAAAAGGCGTGATCATTGCCGGCACTCTTTCGCCACAAGAGTCGCCGGAA ATCCTTGTAGAGCTATCACAGAAACTGGGTTGGCCACTACTCACCGATGCTCAATCTCAGCTTAGACAGCATTCCGGTGT CATTGGTAATGTGGATCAACTCCTACACCAACCCAAAGCCAGGGCTTTGCTGGCCCAGGCTGAATCTGTGCTGGTATTTG GCGGACGCCTGCTCTCAAAACGCCTGATTAACTTCTTAAGCGAACAGAAATGGAAGCGCTATTGGCAGGTATTACCCCAA CAGATGAGATTAGACCCAAGCCACAGTGCTAAGCAGGTATGGCACTCGAGTGTAGCCGCCTTCGCTTCACAAGCCTGGCC GCGATCATCCGACGCCAACTGGGCACTGCAACTCATCCAGTTTAATGACGGGCTTGAGACGCTGTTTCAACAGCAGATCG ATAATGCCGAGTTTGGTGAGGCGATGGTCGTCCGTGCAATAGCTAAAGCACAAAATCGCCAAAGCCAACTCTTTATCGGA AATAGCCTGCCGGTACGCTTATATGACATGTATGCTCCGATCACTCCTGACTATCCCCGCACCTATACCAATCGCGGCGC CTCGGGCATCGATGGCCTGCTCGCCACCGCTTGCGGTGTCGCTAAGCATGAAGGGAAAGCCACCACCTTACTCATAGGCG ATATATCTCAGTTACACGACCTCAACTCTCTGGCCATTGCCCGAACGATTGAGAGCCCTTTTGTCATCGTCATATTGAAT AATGATGGCGGTAATATCTTTAACTTACTTCCGGTCCCCGACGAGAAGCTCAGGAGTGATTATTACCGTCTGGCCCATGG GCTGGAGTTTGGCTATGGCGCGGCTATGTTCGGCCTGGCCTACAACCGGGTCGATGACTTCGAGAGTTTCAACGAAGCCT ATCAAGAGGCTATCGCCTTTCAGGGTCCTTCGGTGATTGAGGTTTCGGTCGCCCAACATCAAGCGAGTGAGCAGATCGCC AGCATTGCCACCTGGGTAAAACAAAGCTGA
Upstream 100 bases:
>100_bases GTTTTACCCTAGAGACAGTTATCAAGCATCTCCCGTTAAAAAATACTCCTTTAAAGTGAATCGGGGTACACTATCAGCAT CAAACAACGGGTACTAATCC
Downstream 100 bases:
>100_bases TGTTGGCCCTGTCATGTCATGGAGATAGCCGAAAGCCCGCACTGGTGATGCTGCATGGTTTTCTTGGCAGTAAAAACGAT TGGGACACGCTTATTTCGGA
Product: 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>569_residues MQIDKTAELNLLWGTLILEELSRLGVQHVCMAPGSRSTPLTLAAAKQSKLKQHLHFDERGLGFMALGLAKTSHAPVAIIT TSGTAVANLYPAIIEAWLTQVPLVVLSGDRPPELIDCGANQAIIQPALFAQYAKQINLPTPDIAIRPEALLTMLDEAISN QSLPVHINCMFREPLYPSTMSADFTQYLSTLGNWQHTTSPFNQYGKTSQHSLPTQDSLARFVHGKGVIIAGTLSPQESPE ILVELSQKLGWPLLTDAQSQLRQHSGVIGNVDQLLHQPKARALLAQAESVLVFGGRLLSKRLINFLSEQKWKRYWQVLPQ QMRLDPSHSAKQVWHSSVAAFASQAWPRSSDANWALQLIQFNDGLETLFQQQIDNAEFGEAMVVRAIAKAQNRQSQLFIG NSLPVRLYDMYAPITPDYPRTYTNRGASGIDGLLATACGVAKHEGKATTLLIGDISQLHDLNSLAIARTIESPFVIVILN NDGGNIFNLLPVPDEKLRSDYYRLAHGLEFGYGAAMFGLAYNRVDDFESFNEAYQEAIAFQGPSVIEVSVAQHQASEQIA SIATWVKQS
Sequences:
NA
Specific function: NA
COG id: COG1165
COG function: function code H; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA