Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157373351

GI number:

Start: 239331

End: 242468

Strand: Reverse

Name: Not Available

Synonym: Ssed_0210

Alternate gene names: NA

Gene position: NA

Preceding gene: 157373352

Following gene: 157373348

Centisome position: NA

GC content: NA

Gene sequence:

>3138_bases
ATGCTTAAGAAAATTATCGAGGCCTCAATCAAGCAACGCCTCATGGTATTGATCATCACCATCATGATCACGGTATGGGG
CGTTCAAGAGCTGAGAAATACCCCGTTAGATGCCCTTCCGGATCTTTCCGATGTGCAGGTGATCATTAAAACCCCATTCC
CCGGACAGGCACCAAAACTTGTCGAGGAGCAGGTGACTTACCCGTTATCCACGGCCATGCTCGCTGTACCCGGCGCCAAG
ACAGTTCGAGGCTACTCTTTCTTCGGTGACTCCTATGTGTATGTCATTTTTGAAGATGGTACCGATATCTATTGGGCAAG
ATCCCGGGTTCTGGAATACCTCAATCAGGTCAGCAGCCGCTTACCTCAAGGTATCCAACCCTCTCTGGGACCGGATGCTT
CCGGAGTTGGCTGGATATTCGAGTACGCCTTAGTGGACAGATCCGGTAATTTAGATCTGTCTCAACTGAAAAGCCTACAA
GATTGGTATCTGAAACTGGAGCTCCAAAGTGTCGCTGGAGTCTCCGAAGTCGCCACCGTCGGCGGTATGGAGCAGACCTA
TCAGATAGTGATCGAACCCGATAAGTTGGCCATCTATAAGTTGGATATCGCCTCGATTAAGAATGCGATAGCTAAGTCGA
ATACCGAAGCCGGTGGTTCGGTTATCGAGATGGCCGAAGCCGAATACATGGTGCGAGCCAAAGGCTATCGACAGACATTA
GATGATTTCAGAGAGATCCCTCTGGGAATAACGAGCCCCTCCGGTACCCCTCTGCTGCTTAAAGATGTGGCTACCATTCG
AAAAGGCCCCGCGTCTCGCCGAGGTATTGCCGAGCTCGACGGTGAAGGAGAGGTGGTCGGTGGCATTATCATCATGCGTT
ATGGCGAGAATGCATTAGCCACAATCGAAGCGGTAAAAGATAAGCTGGAACAGCTTAAGGCCGGTCTCCCGGAAGGGGTT
GAGATCATCCCAACCTACGACAGATCTCAACTGATCGAAAGTTCGGTCGAAAATCTACTCCATAAGGTCGTAGAGGAGAT
GTTTGTGGTCGGTCTGGTGTGTCTGCTTTTCTTGCTGCATGCTCGCTCGACACTCGTTGCCGTGATCACCTTGCCTTTGG
CTATTCTCATCGCCTTTATCGTGATGAACAAGATGGGGGTGAATGCCAATATTATGAGCCTCGGCGGCATTGCAATTGCT
ATCGGGGCGGTGGTCGATGGCGCCATCGTCATGATCGAGAATATGCATAAACATCTCGAGCATTTTAAAGAGAAATATCA
ACGGCCACCTAACAATAAGGAGCACTGGAAGATAGTCACAGAGGCGTCCATCGAGGTCGGTCCTGCGCTGTTCTTTTCAC
TGCTGATTATTACGTTAAGCTTCGTGCCCGTCTTTGCACTCGAAGCCCAAGAGGGTCGGTTATTCAGCCCCTTAGCCTAT
ACCAAGACCTTTGCGATGGCTGCGGCGGCCCTGCTTTCGATAACCTTAGTGCCCATTCTGATGGGTTTCTTCATTCGAGG
TAAGATCCCCAAGGAGACCAGTAATCCAATCAGTCGGGTGTTGATCGCAATTTACAAGCCCTCACTGACACTGGTGTTAA
GATTTCCTAAGATCACACTCGTTATCGCCGTCATTACCCTACTCAGCGCCTGGTATCCTCTGAATAACTTAGGCAGTGAA
TTTATGCCTGAGCTTGAAGAGGGCGATCTACTCTATATGCCTACCGCTCTGCCGGGGATCAGTGCCAGTAAGGCCGCGGA
GATATTGCAACAAACCGATCGACTGATTAAAACCGTGCCTGAGGTCAAGCGGGTATTTGGTAAAGTCGGCAGGGCCGAAA
CGGCCACCGATCCTGCACCATTAACTATGCTTGAAACCACCATCATGTTGAATCCAAGAGATGAGTGGAGAGAAGGCGTC
GCGCTTCAAGATATTATCGACCAACTGCAGCAGACGGTAAAAGTTCCCGGCCTGACTAACGCCTGGGTTCAACCCATCAA
AACCCGCATAGATATGCTCTCTACCGGTATCAAGACGCCGGTAGGCATTAAGATAACGGGGGCCGATGTCGATGAACTGC
AGAAAATTGGTACCAATATCGAAGCCATCCTCAGCAAGCTGCCGAATACTAAATCAGCCTATGCCGAACGCGTCGGTGGT
GGCCGATACATAGATATTACGCCTAAACTCGATGTTGCTTCCCGCTACGACATGACCCTCACCGACATACAGGATGTGGT
TCGTTACGCCATCGGCGGTATGGAGATAGGTGAATCGGTACAGGGCGCGGAGCGATATCCAATTAACCTTCGCTACCCCA
GAGAGCTCAGGGATAATATCGAGAAACTCAGGGAGCTTCCCGTGATCACCAAAACGGGTCATTACCTGCCGCTGCGTAAC
TTAGCCGATATCGAGATCACCGATGGGGCACCTATGCTCAAGAGTGAAAATGGTCGCCTGATATCCTGGGTGTTTGTCGA
TATTGAGGGCACCTCAATTGGCGAATATATCGATGAGGCAAAGCAGGCACTGGATAACGTGCTCACTATACCTCCCAGAT
ATAGCTATGGTTTCGCAGGTCAGTATGAGTATATGCAACGCGTCGATGCCAAACTGAAGAAAGTGATACCTATGGCACTC
GGGGTTATCTTCATTCTGCTTATGATGACCTTCGGCTCGACACTACAGGCGGGGATTATCATGCTCAGCCTGCCGTTTGC
CTTGGTTGGTAGCACCTGGTTACTCTATGCCTTGGAATACAACATGTCAGTTGCCGTCGCCGTCGGTATGATCGCACTGG
CGGGGGTTGCAGCCGAATTCGGAGTGGTGATGTTGGTCTACCTGAATAACGCCATCAAGCATAGAAAGGAGACCGGCGGC
TATGAATCTGTCACGGATCTCAAGGAAGCCTTAATCGAAGGCGCAGTTATGCGTATTCGCCCTAAGGCCATGACAGTCGC
GACCATCTTCTTCGGACTCCTACCCATCATGTGGGGATCGGGAGCGGGCAATGATGTGATGCAGAAGATTGCCGCACCTA
TGATAGGAGGAATGGTCACAGCGCCCTTGTTATCTCTTTTCGTGTTGCCGGCACTCTACCTGATCATCTATGGCAGAAAG
TTAAACTCGACGCAGTAA

Upstream 100 bases:

>100_bases
ATGAAGCCTCAATTAATCAGAGGCTCACTATGCTGGTGATCGACAAGGTTGAAGCTCTGATAACCAGACTAACCCCCTTG
GATAATTGGAGGAGTAGATA

Downstream 100 bases:

>100_bases
TCCCCATTGGTATAAGCCATCATTAAAAAAGCACAGTCCACTGGTGGGCTGTGCTTTTATTTATCAGTTATAAACGAAAT
CGCTTCACACAACGGGTAAG

Product: CzcA family heavy metal efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1045_residues
MLKKIIEASIKQRLMVLIITIMITVWGVQELRNTPLDALPDLSDVQVIIKTPFPGQAPKLVEEQVTYPLSTAMLAVPGAK
TVRGYSFFGDSYVYVIFEDGTDIYWARSRVLEYLNQVSSRLPQGIQPSLGPDASGVGWIFEYALVDRSGNLDLSQLKSLQ
DWYLKLELQSVAGVSEVATVGGMEQTYQIVIEPDKLAIYKLDIASIKNAIAKSNTEAGGSVIEMAEAEYMVRAKGYRQTL
DDFREIPLGITSPSGTPLLLKDVATIRKGPASRRGIAELDGEGEVVGGIIIMRYGENALATIEAVKDKLEQLKAGLPEGV
EIIPTYDRSQLIESSVENLLHKVVEEMFVVGLVCLLFLLHARSTLVAVITLPLAILIAFIVMNKMGVNANIMSLGGIAIA
IGAVVDGAIVMIENMHKHLEHFKEKYQRPPNNKEHWKIVTEASIEVGPALFFSLLIITLSFVPVFALEAQEGRLFSPLAY
TKTFAMAAAALLSITLVPILMGFFIRGKIPKETSNPISRVLIAIYKPSLTLVLRFPKITLVIAVITLLSAWYPLNNLGSE
FMPELEEGDLLYMPTALPGISASKAAEILQQTDRLIKTVPEVKRVFGKVGRAETATDPAPLTMLETTIMLNPRDEWREGV
ALQDIIDQLQQTVKVPGLTNAWVQPIKTRIDMLSTGIKTPVGIKITGADVDELQKIGTNIEAILSKLPNTKSAYAERVGG
GRYIDITPKLDVASRYDMTLTDIQDVVRYAIGGMEIGESVQGAERYPINLRYPRELRDNIEKLRELPVITKTGHYLPLRN
LADIEITDGAPMLKSENGRLISWVFVDIEGTSIGEYIDEAKQALDNVLTIPPRYSYGFAGQYEYMQRVDAKLKKVIPMAL
GVIFILLMMTFGSTLQAGIIMLSLPFALVGSTWLLYALEYNMSVAVAVGMIALAGVAAEFGVVMLVYLNNAIKHRKETGG
YESVTDLKEALIEGAVMRIRPKAMTVATIFFGLLPIMWGSGAGNDVMQKIAAPMIGGMVTAPLLSLFVLPALYLIIYGRK
LNSTQ

Sequences:
NA

Specific function: NA

COG id: COG3696

COG function: function code P; Putative silver efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA