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The map label for this gene is yahC [H]

Identifier: 157159229

GI number: 157159229

Start: 365779

End: 366276

Strand: Reverse

Name: yahC [H]

Synonym: EcE24377A_0335

Alternate gene names: 157159229

Gene position: 366276-365779 (Counterclockwise)

Preceding gene: 157159464

Following gene: 157156304

Centisome position: 7.36

GC content: 52.81

Gene sequence:

>498_bases
ATGAACGGACTCACGGCAACGGGTGTCACCGTCGGTATTTGTGCAGGGCTTTGGCAGTTAGTGTCTTCACATGTCGGGCT
CTCTCAAGGATGGGAATTATTAGGAACCATTGGCTTCGTCGCCTTTTGCAGTTTTTATGCCGCAGGCGGCGGTAAATCGG
GGTTTATCAGAAGTCTGGCGGTTAATTATTCCGGGATGGTGTGGGCGTTTTTCGCCGCGCTGACTGCCGGTTGGCTGGCC
TCGGTGAGTGGGATTTCTGGGTTCTGGGCGAGCGTGATTACTACCGTGCCTTTCTCAGCGGTAGTGGTCTGGCAAGGACG
TTTCTGGTTACTGTCATTCATTCCCGGTGGCTTTCTCGGCATGACGCTGTTTTTTGCCTGCGGGATGAACTGGACGGTGA
CGTTACTGGGTTTTCTGGCGGGTAACTGCGTGGGGATAATTTCAGAATATGGCGGACAAAAATTAAGCGAAGCGACGACT
AAACGCGACGGGTATTAA

Upstream 100 bases:

>100_bases
TTCTTTGACCCGATACCCTTTCACTCAATCAGGTTTTATTTCTCTATAGTCTGCACATGTAAGAGTAGCTTTCGTCCATG
TCTAACCAGAGGGGAACAAG

Downstream 100 bases:

>100_bases
AAGTTATTCAAAAATGATTATCTATCTTTAATCGATACCTCTACAGTCATGGCTGGAGAAATTCATATTAGATAATGGCG
GGAATGGTTTAATGAACTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLAVNYSGMVWAFFAALTAGWLA
SVSGISGFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFACGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATT
KRDGY

Sequences:

>Translated_165_residues
MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLAVNYSGMVWAFFAALTAGWLA
SVSGISGFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFACGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATT
KRDGY
>Mature_165_residues
MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLAVNYSGMVWAFFAALTAGWLA
SVSGISGFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFACGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATT
KRDGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycdZ [H]

Homologues:

Organism=Escherichia coli, GI1786509, Length=165, Percent_Identity=97.5757575757576, Blast_Score=314, Evalue=2e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 17327; Mature: 17327

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLA
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VNYSGMVWAFFAALTAGWLASVSGISGFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHCCCHHHH
MTLFFACGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKRDGY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLA
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VNYSGMVWAFFAALTAGWLASVSGISGFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHCCCHHHH
MTLFFACGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKRDGY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]