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The map label for this gene is ydhM [C]

Identifier: 157158781

GI number: 157158781

Start: 4837283

End: 4837501

Strand: Reverse

Name: ydhM [C]

Synonym: EcE24377A_4845

Alternate gene names: 157158781

Gene position: 4837501-4837283 (Counterclockwise)

Preceding gene: 157159431

Following gene: 157155073

Centisome position: 97.15

GC content: 46.58

Gene sequence:

>219_bases
ATGACAGGCGAAAATCGTGGCCGGGGAAGGCCGCGAAAGACAGAAAGTACCTATGCAGATACTCGTAATGATCTGATCCG
CAGTGGCCTTGAACTGCTGACGCAGAATGGTTTTCTTGCGACGGGAGTCGATGCCATTGTTAAAAATGCCAATGTCCCTA
AAGGCTCATTTTATTACTACCTTAAGAGTAAAGAGGATTATGCTGTCAACGACGGATGA

Upstream 100 bases:

>100_bases
GGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCA
CTATTGCTGGGTAAGATCAC

Downstream 100 bases:

>100_bases
AAAGTGATCCACTTATATCTCCACCAACGGCCCAATATTGATCCACCGTTTTACTCAGGATTAGCTTCTGCTATAACCCC
GGCCTTTCGTTTCTGTCTGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; HTH Regulator TetR Family; Transcriptional Regulator TetR

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MTGENRGRGRPRKTESTYADTRNDLIRSGLELLTQNGFLATGVDAIVKNANVPKGSFYYYLKSKEDYAVNDG

Sequences:

>Translated_72_residues
MTGENRGRGRPRKTESTYADTRNDLIRSGLELLTQNGFLATGVDAIVKNANVPKGSFYYYLKSKEDYAVNDG
>Mature_71_residues
TGENRGRGRPRKTESTYADTRNDLIRSGLELLTQNGFLATGVDAIVKNANVPKGSFYYYLKSKEDYAVNDG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8005; Mature: 7874

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGENRGRGRPRKTESTYADTRNDLIRSGLELLTQNGFLATGVDAIVKNANVPKGSFYYY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEE
LKSKEDYAVNDG
EECCCCCCCCCC
>Mature Secondary Structure 
TGENRGRGRPRKTESTYADTRNDLIRSGLELLTQNGFLATGVDAIVKNANVPKGSFYYY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEE
LKSKEDYAVNDG
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA