Click here to switch to the map view.

The map label for this gene is ydeP [H]

Identifier: 157158510

GI number: 157158510

Start: 1694043

End: 1696322

Strand: Reverse

Name: ydeP [H]

Synonym: EcE24377A_1690

Alternate gene names: 157158510

Gene position: 1696322-1694043 (Counterclockwise)

Preceding gene: 157155710

Following gene: 157159155

Centisome position: 34.07

GC content: 49.96

Gene sequence:

>2280_bases
ATGAAGAAAAAAATTGAATCCTACCAGGGTGCTGCCGGTGGTTGGGGTGCTGTTAAATCCGTAGCGAATGCAGTACGTAA
GCAGATGGATATACGCCAGGATGTTATTGCCATGTTTGACATGAATAAGCCAGAGGGCTTTGACTGTCCGGGTTGTGCAT
GGCCAGATCCTAAGCACAGTGCGTCATTCGACATTTGTGAAAACGGCGCAAAAGCAATCGCCTGGGAAGTCACGGATAAG
CAGGTAAACGCCTCTTTCTTTGCTGAGAATACGGTTCAATCATTACTTACCTGGGGAGACCACGAGCTTGAGGCTGCGGG
GCGACTCACTCAGCCTTTGAAATATGATGCCGTCAGCGACTGTTACAAGCCATTAAGCTGGCAACAAGCTTTCGATGAAA
TTGGCGCACGCCTTCAAAGCTATAGTGATCCCAATCAGGTTGAATTCTATACTTCGGGCCGCACTTCCAATGAAGCTGCC
TTTCTTTATCAGCTTTTTGCCCGTGAATACGGGAGCAATAACTTTCCCGACTGCTCCAACATGTGCCATGAACCGACAAG
CGTGGGTTTGGCAGCGAGTATCGGTGTAGGTAAAGGGACCGTGTTGCTGGAAGACTTTGAGAAGTGCGATTTAGTCATTT
GCATTGGGCATAACCCTGGTACAAACCACCCTCGCATGCTGACTTCGTTGCGCGCTTTAGTGAAACGGGGAGCGAAAATG
ATCGCCATCAATCCTCTACAGGAACGTGGCCTGGAGCGATTTACTGCACCGCAAAACCCGTTTGAAATGCTGACGAACTC
TGAGACTCAGTTGGCCAGTGCCTACTATAACGTGCGCATTGGTGGTGATATGGCGTTGCTCAAGGGGATGATGCGCCTGT
TAATTGAGCGCGATGATGCTGCAAGCGCCGCAGGTCGGCCCTCATTGCTGGATGACGAATTTATTCAAACGCATACCGTC
GGCTTTGACGAGCTACGCCGTGACGTTCTCAATTCCGAGTGGAAAGATATCGAACGTATTTCTGGATTAAGTCAGACTCA
AATCGCCGAACTGGCTGATGCATATGCCGCTGCCGAACGAACCATTATCTGTTACGGAATGGGGATCACTCAGCACGAAC
ATGGTACCCAGAATGTACAGCAACTGGTCAATCTGCTGTTGATGAAAGGTAACATTGGCAAGCCTGGTGCGGGTATCTGC
CCACTACGTGGCCACTCTAATGTACAGGGCGACCGAACCGTCGGTATCACCGAGAAACCGTCTGCAGAGTTTCTGGCTCG
CCTGGGTGAGCGCTATGGCTTCACACCACCTCAAGCACCTGGACATGCTGCAATTGCCAGCATGCAAGCAATATGTACAG
GGCAGGCTCGAGCATTGATCTGCATGGGGGGCAACTTTGCACTGGCAATGCCAGATCGGGAAGCGAGCGCTGTACCGTTA
ACGCAATTAGATCTGGCGGTACACGTAGCCACTAAGCTTAACCGCTCTCATCTGCTGACCGCACGGCATAGCTATATTCT
GCCGGTTCTGGGACGTAGCGAGATTGACATGCAAAAAAGCGGTGCGCAGGCGGTAACCGTTGAGGATTCAATGTCGATGA
TTCATGCCTCGCGTGGCGTGTTAAAACCCGCCGGTGTAATGCTGAAATCAGAGTGTGCAGTGGTCGCGGGAATCGCGCAG
GCAGCACTACCCCAGAGCGTGGTAGCCTGGGAGTATCTGGTGGAAGATTATGATCGCATTCGCAATGACATTGAAGCTGT
GCTGCCAGAGTTCGCCGATTATAACCAGCGCATCCGACATCCTGGTGGTTTTCACCTGATAAACGCTGCTGCTGAAAGGC
GCTGGATGACTCAGTCAGGTAAGGCTAATTTCATTACCAGCAAAGGGCTGTTAGAAGATCCCTCTTCAGCGTTTAACAGT
AAGCTGGTCATGGCGACAGTACGCAGCCACGATCAGTACAACACGACGATTTATGGTATGGATGATCGCTATCGAGGGGT
ATTCGGTCAACGAGATGTGGTCTTTATGAGTGCTAAACAAGCTAAAATTTGCCATGTAAAAAACGGCGAAAGAGTTAATC
TTATTGCGCTTACGCCAGACGGTAAGCGCAGCTCACGCCGCATGGATAGATTAAAAGTGGTCATTTACCCTATGGCTGAC
CGCTCACTAGTGACCTATTTTCCAGAATCGAATCACATGCTAACACTTGATAACCACGATCCATTAAGTGGCATTCCTGG
CTATAAAAGTATTCCGGTTGAATTAGAACCATCAAATTAA

Upstream 100 bases:

>100_bases
CCTACTCTTATATATCCATGTTGGCGATAATCCCTTTGTATGTACTGTGCATCATCGCTATTACAAATCCTAATAATTCA
TTTCCACACAGGATAAGTAG

Downstream 100 bases:

>100_bases
TGCCTCTTCTCATTTCTTCTGCTGTCATCCGCACAGCAGAAGAATCCCTCATTGACTATTATCGCGCAATTTGCTCACAT
GGATTAAATTAAACTACATA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 759; Mature: 759

Protein sequence:

>759_residues
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHSASFDICENGAKAIAWEVTDK
QVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTV
GFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGIC
PLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPQAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQ
AALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTQSGKANFITSKGLLEDPSSAFNS
KLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICHVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN

Sequences:

>Translated_759_residues
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHSASFDICENGAKAIAWEVTDK
QVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTV
GFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGIC
PLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPQAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQ
AALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTQSGKANFITSKGLLEDPSSAFNS
KLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICHVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN
>Mature_759_residues
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHSASFDICENGAKAIAWEVTDK
QVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTV
GFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGIC
PLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPQAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQ
AALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTQSGKANFITSKGLLEDPSSAFNS
KLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICHVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN

Specific function: Probably involved in acid resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=759, Percent_Identity=99.4729907773386, Blast_Score=1579, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=308, Percent_Identity=30.8441558441558, Blast_Score=155, Evalue=7e-39,
Organism=Escherichia coli, GI3868720, Length=376, Percent_Identity=25.7978723404255, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI3868719, Length=391, Percent_Identity=25.3196930946292, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 83472; Mature: 83472

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHS
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSD
CCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHH
CYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSN
HHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHH
MCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
HCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEE
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDA
EEECCHHHCCHHHHCCCCCHHHHHCCCCHHHEEEEEEEEECCCHHHHHHHHHHHHCCCCC
ASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAER
CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
TIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKP
EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
SAEFLARLGERYGFTPPQAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCH
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGV
HHHHHHHHHHHHCCHHHEEEECCCEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHHCCC
LKPAGVMLKSECAVVAGIAQAALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRH
CCCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
PGGFHLINAAAERRWMTQSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGM
CCCEEEEHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEC
DDRYRGVFGQRDVVFMSAKQAKICHVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
CCHHCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCHHHHHHCEEEEEEEECCC
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN
CCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHS
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSD
CCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHH
CYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSN
HHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHH
MCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM
HCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEE
IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDA
EEECCHHHCCHHHHCCCCCHHHHHCCCCHHHEEEEEEEEECCCHHHHHHHHHHHHCCCCC
ASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAER
CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
TIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKP
EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
SAEFLARLGERYGFTPPQAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCH
TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGV
HHHHHHHHHHHHCCHHHEEEECCCEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHHCCC
LKPAGVMLKSECAVVAGIAQAALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRH
CCCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
PGGFHLINAAAERRWMTQSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGM
CCCEEEEHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEEC
DDRYRGVFGQRDVVFMSAKQAKICHVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD
CCHHCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCHHHHHHCEEEEEEEECCC
RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN
CCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]