| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is bdhA [H]
Identifier: 157158451
GI number: 157158451
Start: 1660174
End: 1660944
Strand: Reverse
Name: bdhA [H]
Synonym: EcE24377A_1665
Alternate gene names: 157158451
Gene position: 1660944-1660174 (Counterclockwise)
Preceding gene: 157158663
Following gene: 157156859
Centisome position: 33.35
GC content: 53.57
Gene sequence:
>771_bases ATGAATTTACAAGGTAAAACTGCGCTGGTGACGGGGTCCACCAGCGGTATCGGACTCGGTATTGCTCAGACACTGGCAAA CGCTGGCGCGCAAGTGATCCTCAACGGCTTCGGTGATGTTGACGCGGCAATCAATGCGGTTTCTCGTATGGGTAAAACGC CTGGCTATCATGAGGCAGACCTCAGCGATGAATCGCAAATTATCAACATGATGGCCTACGCACGGCGGGAATTTGGCGGT GTGGACATTCTGGTGAATAACGCCGGGATCCAGTATGTCTCCCCGGTTGAATCTTTCCCTGTAGAAAAATGGAACGCCAT TATCGCTATCAATCTCTCTTCTGTCTTTCACACCACGCGTCTGGCACTGCCAGAAATGCGCACTCGTAACTGGGGTCGGA TCATTAACATTGCCTCTGTGCATGGGCTGGTAGCGTCGAAAGACAAATCAGCTTATGTTGCGGCAAAACATGGCGTGGTG GGACTCACAAAGACCATTGCTCTGGAAACTGCGCAGACGGGTATTACCTGCAACGCGCTCTGCCCTGGCTGGGTGCTGAC GCCGCTGGTACAACAGCAGATTGATAAGCGCATTGCGCAAGGCGAAGATGCGGAAAGCGCGCGTGACGCCTTACTGGCAG AAAAACAGCCTTCTCGTGAATTTGTGACTCCGCAACAACTGGGTGAACTGGCGCTGTTTCTCTGTTCGGATGCGGCAGCA CAAGTGCGTGGGGTGGCGTGGAATATGGATGGCGGTTGGGTAGCGCAGTAA
Upstream 100 bases:
>100_bases CTTACGGCGGCATCTTCGCAATTACGATCATTAAAAGTCTGGCCGTGCTGTTTATCATCGGCGTGTACTACACCACCGGC ATTGTCTAAGGAAAATCATC
Downstream 100 bases:
>100_bases GTGTTCGCCGGATGACGCGTCATCCGGCAATGCTTTACGATTTCAACTGGTAATCAAGCGTAATTTCCGCTTTCAGTACC TGAGAAACCGGGCATCCTGC
Product: 3-hydroxybutyrate dehydrogenase
Products: NA
Alternate protein names: BDH; 3-hydroxybutyrate dehydrogenase; 3-HBDH [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNLQGKTALVTGSTSGIGLGIAQTLANAGAQVILNGFGDVDAAINAVSRMGKTPGYHEADLSDESQIINMMAYARREFGG VDILVNNAGIQYVSPVESFPVEKWNAIIAINLSSVFHTTRLALPEMRTRNWGRIINIASVHGLVASKDKSAYVAAKHGVV GLTKTIALETAQTGITCNALCPGWVLTPLVQQQIDKRIAQGEDAESARDALLAEKQPSREFVTPQQLGELALFLCSDAAA QVRGVAWNMDGGWVAQ
Sequences:
>Translated_256_residues MNLQGKTALVTGSTSGIGLGIAQTLANAGAQVILNGFGDVDAAINAVSRMGKTPGYHEADLSDESQIINMMAYARREFGG VDILVNNAGIQYVSPVESFPVEKWNAIIAINLSSVFHTTRLALPEMRTRNWGRIINIASVHGLVASKDKSAYVAAKHGVV GLTKTIALETAQTGITCNALCPGWVLTPLVQQQIDKRIAQGEDAESARDALLAEKQPSREFVTPQQLGELALFLCSDAAA QVRGVAWNMDGGWVAQ >Mature_256_residues MNLQGKTALVTGSTSGIGLGIAQTLANAGAQVILNGFGDVDAAINAVSRMGKTPGYHEADLSDESQIINMMAYARREFGG VDILVNNAGIQYVSPVESFPVEKWNAIIAINLSSVFHTTRLALPEMRTRNWGRIINIASVHGLVASKDKSAYVAAKHGVV GLTKTIALETAQTGITCNALCPGWVLTPLVQQQIDKRIAQGEDAESARDALLAEKQPSREFVTPQQLGELALFLCSDAAA QVRGVAWNMDGGWVAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=31.1023622047244, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI31542939, Length=215, Percent_Identity=34.4186046511628, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI32483357, Length=257, Percent_Identity=30.7392996108949, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI19923817, Length=263, Percent_Identity=26.615969581749, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI4504505, Length=267, Percent_Identity=27.3408239700375, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI15277342, Length=265, Percent_Identity=29.0566037735849, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI20149619, Length=251, Percent_Identity=29.4820717131474, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI4758504, Length=211, Percent_Identity=31.2796208530806, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI224922801, Length=175, Percent_Identity=34.8571428571429, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI109715829, Length=248, Percent_Identity=29.4354838709677, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI59889578, Length=186, Percent_Identity=30.6451612903226, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI83715985, Length=190, Percent_Identity=31.0526315789474, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI126723191, Length=199, Percent_Identity=30.1507537688442, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI142976729, Length=196, Percent_Identity=30.1020408163265, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=29.1338582677165, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI40254992, Length=205, Percent_Identity=27.8048780487805, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=32.4607329842932, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI210032110, Length=221, Percent_Identity=28.0542986425339, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI7705925, Length=254, Percent_Identity=27.9527559055118, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI126723750, Length=261, Percent_Identity=28.735632183908, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI4502599, Length=271, Percent_Identity=25.4612546125461, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI157739938, Length=190, Percent_Identity=25.2631578947368, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI7657478, Length=188, Percent_Identity=28.1914893617021, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI4502601, Length=168, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI310128830, Length=203, Percent_Identity=26.6009852216749, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI310115468, Length=203, Percent_Identity=26.6009852216749, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=27.4611398963731, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40807363, Length=199, Percent_Identity=26.1306532663317, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI10190704, Length=257, Percent_Identity=22.9571984435798, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI4503301, Length=255, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI40254986, Length=191, Percent_Identity=27.7486910994764, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI223718074, Length=197, Percent_Identity=26.9035532994924, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=37.5494071146245, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=36.6141732283465, Blast_Score=143, Evalue=9e-36, Organism=Escherichia coli, GI1790717, Length=254, Percent_Identity=30.3149606299213, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=32.6848249027237, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=31.5175097276265, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1787905, Length=259, Percent_Identity=30.1158301158301, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788459, Length=253, Percent_Identity=30.4347826086957, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI2367175, Length=253, Percent_Identity=28.8537549407115, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=28.4046692607004, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=29.1828793774319, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=25.390625, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367365, Length=252, Percent_Identity=27.3809523809524, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787820, Length=178, Percent_Identity=30.3370786516854, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786701, Length=235, Percent_Identity=26.8085106382979, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI25147288, Length=258, Percent_Identity=28.2945736434109, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17560676, Length=261, Percent_Identity=28.735632183908, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17555706, Length=252, Percent_Identity=28.1746031746032, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=29.6875, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71994604, Length=255, Percent_Identity=29.4117647058824, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17564282, Length=196, Percent_Identity=30.6122448979592, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17561402, Length=211, Percent_Identity=31.2796208530806, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI193203115, Length=191, Percent_Identity=31.9371727748691, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=31.7708333333333, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17538182, Length=207, Percent_Identity=32.3671497584541, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17568967, Length=209, Percent_Identity=30.1435406698565, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17508895, Length=194, Percent_Identity=30.9278350515464, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17536025, Length=255, Percent_Identity=28.6274509803922, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=28.1368821292776, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=28.3524904214559, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=25.8823529411765, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71982365, Length=222, Percent_Identity=26.5765765765766, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI72000259, Length=272, Percent_Identity=28.3088235294118, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17531453, Length=201, Percent_Identity=32.3383084577114, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=25.9398496240602, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193204405, Length=196, Percent_Identity=30.6122448979592, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562908, Length=196, Percent_Identity=30.1020408163265, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17563726, Length=248, Percent_Identity=26.6129032258064, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562906, Length=196, Percent_Identity=30.1020408163265, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17567345, Length=198, Percent_Identity=24.7474747474747, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17561272, Length=256, Percent_Identity=28.515625, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17555612, Length=214, Percent_Identity=28.0373831775701, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534694, Length=261, Percent_Identity=25.2873563218391, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17544670, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17562904, Length=206, Percent_Identity=29.126213592233, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=193, Percent_Identity=29.0155440414508, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6320089, Length=191, Percent_Identity=27.2251308900524, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6322227, Length=203, Percent_Identity=25.615763546798, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=193, Percent_Identity=27.979274611399, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI24644339, Length=260, Percent_Identity=32.3076923076923, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=32.295719844358, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=28.7937743190661, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI18859837, Length=190, Percent_Identity=32.6315789473684, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=28.968253968254, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=29.1828793774319, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=28.90625, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI28571387, Length=245, Percent_Identity=28.9795918367347, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI21358495, Length=193, Percent_Identity=29.0155440414508, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI21355631, Length=174, Percent_Identity=31.0344827586207, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24643142, Length=257, Percent_Identity=26.4591439688716, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI28574402, Length=206, Percent_Identity=30.5825242718447, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24584744, Length=206, Percent_Identity=30.5825242718447, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=26.5625, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17737361, Length=202, Percent_Identity=29.7029702970297, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24665243, Length=220, Percent_Identity=29.0909090909091, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221331218, Length=220, Percent_Identity=29.0909090909091, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24665247, Length=221, Percent_Identity=28.5067873303167, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24640492, Length=249, Percent_Identity=26.1044176706827, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI221331216, Length=221, Percent_Identity=28.5067873303167, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281364892, Length=178, Percent_Identity=27.5280898876405, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640442, Length=195, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581726, Length=193, Percent_Identity=27.4611398963731, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356301, Length=199, Percent_Identity=24.6231155778894, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24648944, Length=198, Percent_Identity=29.2929292929293, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI17647419, Length=198, Percent_Identity=23.7373737373737, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI281364494, Length=253, Percent_Identity=26.8774703557312, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24644337, Length=263, Percent_Identity=29.6577946768061, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=29.6296296296296, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=29.6296296296296, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011294 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.30 [H]
Molecular weight: Translated: 27216; Mature: 27216
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQGKTALVTGSTSGIGLGIAQTLANAGAQVILNGFGDVDAAINAVSRMGKTPGYHEAD CCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCC LSDESQIINMMAYARREFGGVDILVNNAGIQYVSPVESFPVEKWNAIIAINLSSVFHTTR CCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCHHHCCCCCCCEEEEEEHHHHHHHHH LALPEMRTRNWGRIINIASVHGLVASKDKSAYVAAKHGVVGLTKTIALETAQTGITCNAL HHCCCHHCCCCCCEEEEHHHHCEEECCCCCEEEEECCCCEEHHHHEEEEHHCCCCEECCC CPGWVLTPLVQQQIDKRIAQGEDAESARDALLAEKQPSREFVTPQQLGELALFLCSDAAA CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHH QVRGVAWNMDGGWVAQ HHEEEEEECCCCEECC >Mature Secondary Structure MNLQGKTALVTGSTSGIGLGIAQTLANAGAQVILNGFGDVDAAINAVSRMGKTPGYHEAD CCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCC LSDESQIINMMAYARREFGGVDILVNNAGIQYVSPVESFPVEKWNAIIAINLSSVFHTTR CCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCHHHCCCCCCCEEEEEEHHHHHHHHH LALPEMRTRNWGRIINIASVHGLVASKDKSAYVAAKHGVVGLTKTIALETAQTGITCNAL HHCCCHHCCCCCCEEEEHHHHCEEECCCCCEEEEECCCCEEHHHHEEEEHHCCCCEECCC CPGWVLTPLVQQQIDKRIAQGEDAESARDALLAEKQPSREFVTPQQLGELALFLCSDAAA CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHH QVRGVAWNMDGGWVAQ HHEEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA