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The map label for this gene is yfcU [H]

Identifier: 157157705

GI number: 157157705

Start: 2622876

End: 2625521

Strand: Reverse

Name: yfcU [H]

Synonym: EcE24377A_2632

Alternate gene names: 157157705

Gene position: 2625521-2622876 (Counterclockwise)

Preceding gene: 157156367

Following gene: 157157497

Centisome position: 52.73

GC content: 51.13

Gene sequence:

>2646_bases
ATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCCGTGGTGCATTGCGCTGGCAATGTCAGGGAGTTATAGCAGTGT
CTGGGCTGAAGACGACATTCAGTTTGATTCCCGTTTTCTGGAATTAAAAGGCGACACAAAAATTGATCTGAAGCGTTTTT
CCAGCCAGGGATATGTTGAGCCCGGAAAATACAATTTACAGATTCAACTAAATAAACAGCCATTGGCGGAAGAGTACGAT
ATTTACTGGTATGCTGGTGAAGATGACGCGAGCAAAAGCTATGCTTGTCTGACACCGGAACTGGTAGCGCAGTTTGGTTT
AAAAGAAGACGTGGCGAAAAATCTGCAATGGAGCCACGATGCTAAATGCCTGAAATCCGGTCAACTGGAAGGCATGGAAA
TTAAGGCTGATTTAAGCCAGTCCGCATTAGTCATTTCACTACCGCAGGCTTACCTCGAATATACCTGGCCCGACTGGGAT
CCGCCTTCACGTTGGGATGACGGCATTTCCGGGATCGTCGCGGACTACAGCATCAACGCACAAACCCGGCACGAAGAAAA
TGGCGGTGATGATAGTAACGAGATCAGCGGCAACGGGACGGTCGGGGTTAACCTGGGGCCGTGGCGTATGCGTGCTGACT
GGCAGACTAACTATCAACATACTCGCAGTAATGATGATGACGATGAATTCAGCGGCGATGAAACTCAAAAAAAATGGGAG
TGGAGTCGCTACTATGCCTGGCGGGCGTTACCATCATTAAAAGCCAAACTGGCGCTGGGCGAGGATTACCTCAGATCCGA
TATTTTTGATGGTTTTAACTATGTTGGTGGCAGTGTCAGTACTGACGATCAAATGTTGCCTCCCAATCTGCGCGGCTACG
CGCCAGACATTTCCGGCGTGGCACACACCACAGCAAAAGTGACCGTCAGCCAGATGGGGCGTGTGATTTACGAAACGCAG
GTTCCGGCTGGACCGTTTCGTATTCAGGATCTTGGTGATTCTGTCTCCGGTACGTTGCATATTCGCATTGAAGAACAGAA
CGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTCACTCGTCCAGGTCAGGTTCGCTATAAGATCA
TGATGGGCCGTCCGCAAGAGTGGGGACACCATGTCGAGGGTGAATTTTTTTCTGGTGCTGAAGCTTCCTGGGGGATCGCT
AACGGCTGGTCGTTATATGGCGGCGCACTGGGAGATGAAAACTATCAGTCTGCGGCGCTTGGCGTCGGTCGCGATTTGTC
TACATTCGGCGCGGTCGCGTTTGATGTTACTCACTCGCACACCAAACTGGATAAAGACACCGCTTATGGCAAAGGTTCGC
TGGACGGTAACTCCTTCCGTGTGAGTTATTCCAAAGACTTTGACCAGCTCAACAGCCGCGTTACTTTTGCTGGATATCGC
TTCTCGGAAGAGAACTTTATGACCATGAGCGAGTATCTGGATGCCAGTGACAGCGGAATGGTACGCACGGGCAACGACAA
AGAGATGTACACCGCCACTTATAACCAGAACTTCCGCGATGCGGGTGTTTCGGTTTATCTCAACTATACCCGCCATACCT
ACTGGGATCGCGAGGAGCAGACAAACTACAACATCATGCTCTCGCACTATTTCAATATGGGCAGTATTCGTAATGTCAGC
ATCTCGATGACTGGCTACCGTTACGAGTATGACAACCGGGAGGATAAGGGTATGTACATTTCTCTCAGTATGCCGTGGGG
TGACAACAGTACCGTTAGCTATAACGGTAACTATGGCAGTGGGACGGACAGCAGCCAGGTCGGTTATTTCAGCCGTGTCG
ATGACGCGACTCACTATCAGTTGAACGTCGGCACCAGCGACAAACACACCAGCGTTGATGGCTATTACAGCCATGATGGT
TCGCTGGCGCAGGTTGACCTCAGTGCGAACTACCATGAAGGGCAATACACCTCTGCGGGCTTGTCGTTACAGGGCGGCGC
AACGCTTACTGCCCACGGTGGCGCACTTCACCGTACCCAGAATATGGGCGGGACACGCTTGTTGATTGATGCCGATGGCG
TTGCCGATGTTCCGGTGGAAGGTAACGGTGCTGCTGTTTATACCAATATGTTTGGTAAAGCCGTCGTTTCTGACGTCAAT
AACTATTACCGCAATCAGGCGTATATCGACCTCAACAAATTGCCGGAAAACGCCGAAGCAACCCAGTCGGTGGTGCAAGC
CACGCTAACTGAAGGTGCCATTGGCTACCGTAAATTTGCTGTCATTAGCGGACAAAAAGCGATGGCGGTGCTGCGCCTGA
GCGACGGCAGCCATCCTCCGTTTGGCGCAGAAGTAAAAAATGATAACGAGCAGACAGTGGGCCTTGTCGATGATGACGGC
AATGTTTATCTGGCTGGGGTGAAACCTGGCGAACACATGAGTGTGTTCTGGAGTGGTATTGCGCATTGCGATATCAACCT
GCCGGCCCCGCTGCCTGCCGATCTGTTTAACGGCTTGTTACTGCCATGCCAGCATAAAGGCAACGTCGTGCCGGTTGTTC
CTGATGGCATAAAGCCTGTCATTCAGGAGCAGACGCAACAGGTGACACCCACCAATCCCCCTGTTTCTGTTTCAGCTAAC
CAATAA

Upstream 100 bases:

>100_bases
CCAGATTACTTACCTGTAAGGCATACCCCCATAGCGACACTGCTATGGGGGATTTAAATGGATTTTGACCGAACAAGAAT
AAAAACGGATAGAAACGTGT

Downstream 100 bases:

>100_bases
CGTGATTAAGGAATGATCCATGTCTGATTTACTTTGCTCTGCCAAATTGGGTGCTACGACGCTAGCGTTACTGCTTAGCG
CTGCCAGTTTATCTGCCCAG

Product: fimbrial usher family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 881; Mature: 880

Protein sequence:

>881_residues
MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQIQLNKQPLAEEYD
IYWYAGEDDASKSYACLTPELVAQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTWPDWD
PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDDEFSGDETQKKWE
WSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQ
VPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIA
NGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYR
FSEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNVS
ISMTGYRYEYDNREDKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDG
SLAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVN
NYYRNQAYIDLNKLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTVGLVDDDG
NVYLAGVKPGEHMSVFWSGIAHCDINLPAPLPADLFNGLLLPCQHKGNVVPVVPDGIKPVIQEQTQQVTPTNPPVSVSAN
Q

Sequences:

>Translated_881_residues
MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQIQLNKQPLAEEYD
IYWYAGEDDASKSYACLTPELVAQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTWPDWD
PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDDEFSGDETQKKWE
WSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQ
VPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIA
NGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYR
FSEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNVS
ISMTGYRYEYDNREDKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDG
SLAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVN
NYYRNQAYIDLNKLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTVGLVDDDG
NVYLAGVKPGEHMSVFWSGIAHCDINLPAPLPADLFNGLLLPCQHKGNVVPVVPDGIKPVIQEQTQQVTPTNPPVSVSAN
Q
>Mature_880_residues
PDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQIQLNKQPLAEEYDI
YWYAGEDDASKSYACLTPELVAQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTWPDWDP
PSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDDEFSGDETQKKWEW
SRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQV
PAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIAN
GWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRF
SEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNVSI
SMTGYRYEYDNREDKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGS
LAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNN
YYRNQAYIDLNKLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTVGLVDDDGN
VYLAGVKPGEHMSVFWSGIAHCDINLPAPLPADLFNGLLLPCQHKGNVVPVVPDGIKPVIQEQTQQVTPTNPPVSVSANQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=850, Percent_Identity=34.8235294117647, Blast_Score=497, Evalue=1e-141,
Organism=Escherichia coli, GI1790772, Length=890, Percent_Identity=26.7415730337079, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI1789533, Length=863, Percent_Identity=27.4623406720742, Blast_Score=274, Evalue=2e-74,
Organism=Escherichia coli, GI1787172, Length=871, Percent_Identity=27.3249138920781, Blast_Score=274, Evalue=2e-74,
Organism=Escherichia coli, GI1786332, Length=861, Percent_Identity=28.2229965156794, Blast_Score=264, Evalue=2e-71,
Organism=Escherichia coli, GI1786744, Length=858, Percent_Identity=26.3403263403263, Blast_Score=245, Evalue=9e-66,
Organism=Escherichia coli, GI1788427, Length=778, Percent_Identity=25.1928020565553, Blast_Score=214, Evalue=1e-56,
Organism=Escherichia coli, GI1789610, Length=853, Percent_Identity=22.5087924970692, Blast_Score=124, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 97537; Mature: 97406

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00133 CARBOXYPEPT_ZN_2 ; PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVE
CCCCCEEEHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCEEEHEECCCCCCCC
PGKYNLQIQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELVAQFGLKEDVAKNLQWSHD
CCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHCCCHHHHHHCCCCCCC
AKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTWPDWDPPSRWDDGISGIVADYSINA
HHHHHCCCCCCEEEEECCCCCEEEEEECHHHHEECCCCCCCCCCCCCCCCCEEEEEEECC
QTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDDEFSGDETQKKWE
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCC
WSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGV
HHHEEEECCCCCHHEEEECCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
AHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASM
CHHHHEEEHHHCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCC
PYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIANGWSLYGGALGDENYQSAAL
CCEECCCCEEEEEEECCCHHHCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCHHHH
GVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYR
CCCCCHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCEEEEEEEE
FSEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQ
ECCCCCEEHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCEECCCCCC
TNYNIMLSHYFNMGSIRNVSISMTGYRYEYDNREDKGMYISLSMPWGDNSTVSYNGNYGS
CCCEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCC
GTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAG
CCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCEEECC
LSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVN
EEECCCEEEEECCCEEEEECCCCCEEEEEECCCCEECCCCCCCCEEEECHHHHHHHHHHH
NYYRNQAYIDLNKLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPP
HHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCC
FGAEVKNDNEQTVGLVDDDGNVYLAGVKPGEHMSVFWSGIAHCDINLPAPLPADLFNGLL
CCCEECCCCCEEEEEEECCCCEEEEECCCCCCEEEEECCEEEEEECCCCCCCHHHHCCCE
LPCQHKGNVVPVVPDGIKPVIQEQTQQVTPTNPPVSVSANQ
EEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEEECCC
>Mature Secondary Structure 
PDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVE
CCCCEEEHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCEEEHEECCCCCCCC
PGKYNLQIQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELVAQFGLKEDVAKNLQWSHD
CCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHCCCHHHHHHCCCCCCC
AKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTWPDWDPPSRWDDGISGIVADYSINA
HHHHHCCCCCCEEEEECCCCCEEEEEECHHHHEECCCCCCCCCCCCCCCCCEEEEEEECC
QTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDDEFSGDETQKKWE
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCC
WSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGV
HHHEEEECCCCCHHEEEECCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
AHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASM
CHHHHEEEHHHCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCC
PYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIANGWSLYGGALGDENYQSAAL
CCEECCCCEEEEEEECCCHHHCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCHHHH
GVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYR
CCCCCHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCEEEEEEEE
FSEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQ
ECCCCCEEHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCEECCCCCC
TNYNIMLSHYFNMGSIRNVSISMTGYRYEYDNREDKGMYISLSMPWGDNSTVSYNGNYGS
CCCEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCC
GTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAG
CCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCEEECC
LSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVN
EEECCCEEEEECCCEEEEECCCCCEEEEEECCCCEECCCCCCCCEEEECHHHHHHHHHHH
NYYRNQAYIDLNKLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPP
HHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCC
FGAEVKNDNEQTVGLVDDDGNVYLAGVKPGEHMSVFWSGIAHCDINLPAPLPADLFNGLL
CCCEECCCCCEEEEEEECCCCEEEEECCCCCCEEEEECCEEEEEECCCCCCCHHHHCCCE
LPCQHKGNVVPVVPDGIKPVIQEQTQQVTPTNPPVSVSANQ
EEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]