| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is phnL [H]
Identifier: 157157230
GI number: 157157230
Start: 4649101
End: 4649781
Strand: Reverse
Name: phnL [H]
Synonym: EcE24377A_4650
Alternate gene names: 157157230
Gene position: 4649781-4649101 (Counterclockwise)
Preceding gene: 157155315
Following gene: 157159054
Centisome position: 93.38
GC content: 60.94
Gene sequence:
>681_bases ATGATTAACGTACAAAACGTCAGTAAAACCTTCATCCTGCACCAGCAAAACGGCGTGCGCCTGCCCGTCTTACAACGTGC CTCGCTCACCGTCAACGCGGGCGAATGCGTGGTGCTCCACGGCCATTCCGGCAGCGGCAAATCAACCTTGCTGCGCTCGC TGTACGCCAACTATCTGCCCGACGAAGGGCAAATCCAGATCAAACACGGTGACGAATGGGTCGATCTGGTCACCGCGCCA GCGCGCAAAGTGGTGGAGATCCGCAAAACCACCGTCGGCTGGGTGAGCCAGTTTCTGCGCGTCATCCCGCGTATTTCAGC ACTGGAAGTGGTGATGCAGCCGCTGCTCGATACCGGCGTTCCGCGTGAAGCCTGCGCCGCTAAAGCCGCGCGTCTGCTCA CCCGCCTGAACGTGCCGGAACGCCTGTGGCACCTGGCGCCATCAACCTTTTCCGGTGGCGAACAGCAGCGCGTCAACATC GCCCGCGGCTTTATCGTCGACTACCCCATTCTGCTGCTCGACGAACCTACCGCCTCGCTGGACGCCAAAAACAGCGCCGC CGTAGTCGAGCTGATTCGCGAAGCCAAAACCCGTGGCGCGGCCATCGTCGGCATCTTCCATGACGAAGCCGTACGTAATG ACGTCGCCGACCGCTTGCACCCAATGGGAGCCTCTGCATGA
Upstream 100 bases:
>100_bases GATGCGGCGTAAACGCCTTATCCGGCCTACAAATGCGCTCCCCGTAGGTCGGATAAGACGCGTCAGCGTCGCATCCGACA CCCGAACCACGAGGCGAAAA
Downstream 100 bases:
>100_bases TTATCAATAACGTCAAACTGGTGCTGGAAAACGAAGTGGTACACGGTTCGCTGGAGGTGCAGGATGGCGAAATCCGCGCC TTTGCCGAAAGCCAGAGCCG
Product: phosphonate C-P lyase system protein PhnL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAP ARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI ARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASA
Sequences:
>Translated_226_residues MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAP ARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI ARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASA >Mature_226_residues MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAP ARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI ARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASA
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4778
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=223, Percent_Identity=25.5605381165919, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790534, Length=226, Percent_Identity=99.1150442477876, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI87081834, Length=209, Percent_Identity=33.9712918660287, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1787029, Length=221, Percent_Identity=37.5565610859729, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=34.5454545454545, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787089, Length=193, Percent_Identity=33.6787564766839, Blast_Score=94, Evalue=5e-21, Organism=Escherichia coli, GI1787105, Length=192, Percent_Identity=31.25, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1789672, Length=222, Percent_Identity=31.5315315315315, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1786703, Length=194, Percent_Identity=36.0824742268041, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1789032, Length=221, Percent_Identity=32.579185520362, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1786398, Length=219, Percent_Identity=29.6803652968037, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1790544, Length=225, Percent_Identity=32.8888888888889, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1789962, Length=197, Percent_Identity=28.4263959390863, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789873, Length=208, Percent_Identity=28.8461538461538, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788644, Length=204, Percent_Identity=30.3921568627451, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI48994997, Length=196, Percent_Identity=32.6530612244898, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789891, Length=188, Percent_Identity=31.9148936170213, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=32.8947368421053, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87081709, Length=218, Percent_Identity=31.1926605504587, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786872, Length=224, Percent_Identity=31.25, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789991, Length=217, Percent_Identity=27.6497695852535, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1787759, Length=216, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI48995001, Length=226, Percent_Identity=26.9911504424779, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI87081791, Length=220, Percent_Identity=28.6363636363636, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI1787500, Length=197, Percent_Identity=26.3959390862944, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI145693107, Length=202, Percent_Identity=29.7029702970297, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=28.7671232876712, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788450, Length=216, Percent_Identity=32.4074074074074, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788506, Length=237, Percent_Identity=29.957805907173, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1790190, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI48994883, Length=208, Percent_Identity=27.4038461538462, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787792, Length=211, Percent_Identity=29.8578199052133, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787712, Length=193, Percent_Identity=29.5336787564767, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787370, Length=198, Percent_Identity=28.7878787878788, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1787112, Length=180, Percent_Identity=30, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1790739, Length=209, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI87082267, Length=187, Percent_Identity=29.9465240641711, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786253, Length=157, Percent_Identity=35.6687898089172, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1790525, Length=213, Percent_Identity=26.7605633802817, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788897, Length=194, Percent_Identity=30.4123711340206, Blast_Score=61, Evalue=5e-11, Organism=Escherichia coli, GI1787758, Length=197, Percent_Identity=28.4263959390863, Blast_Score=61, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=221, Percent_Identity=28.5067873303167, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322640, Length=197, Percent_Identity=34.010152284264, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6321121, Length=237, Percent_Identity=27.0042194092827, Blast_Score=62, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319856, Length=214, Percent_Identity=27.1028037383178, Blast_Score=62, Evalue=6e-11, Organism=Drosophila melanogaster, GI17136662, Length=192, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24659289, Length=197, Percent_Identity=32.48730964467, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012701 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 24704; Mature: 24704
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLP CCCCCCCCEEEEEECCCCCCCCEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCC DEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGV CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC PREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASL CHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCC DAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASA CCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLP CCCCCCCCEEEEEECCCCCCCCEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCC DEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGV CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC PREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASL CHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCC DAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASA CCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]