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The map label for this gene is yfcR [H]

Identifier: 157156990

GI number: 157156990

Start: 2621585

End: 2622088

Strand: Reverse

Name: yfcR [H]

Synonym: EcE24377A_2630

Alternate gene names: 157156990

Gene position: 2622088-2621585 (Counterclockwise)

Preceding gene: 157157497

Following gene: 157157908

Centisome position: 52.66

GC content: 47.62

Gene sequence:

>504_bases
ATGAGACGAATTTTTCTGCACCGTTCAAGCGTATTACTGACCTGCTGGGTAATAAGCCATCTTGCTGTCGCTGGCGATAT
GAAAACTGTGCCCCTGACACTGCGAGTTCTCGTCGATGGTCCGCCTCCCTGTACCATCAAAGGGAGTAAGGTGGAATTTG
GCGATATGATTGGTAATAACGTTAATGGCACCAACTACCGACAAGATGCGAAATACACCCTGAACTGCGCTAATAGCCTT
GCCAACGACTTACGGATGCAACTTCGGGGCGACACATGGGTAATTAACGGTGAAACGGTACTGCGCACCGATATCACAGC
ATTGGGTATCCGGATAGAAAATGCTGCCGATAACTCATTGTTCACTATCGGTAATAATAGCTGGACGGCGTTCAACATTA
ATAACCAACCGCAATTGAAAGCCGTACCTGTGAAAGAGAATGGTGCGCAGCTAGCGACAGGAGAATTTAACGCCAGATTG
ACCATGGTGGTGGATTACCAATGA

Upstream 100 bases:

>100_bases
CGACTTTGACGCGCGGATGCCACTGTTTTTCAAATGCACAGGGAATACCTGTCAGGTGGATGAAGAGCATAGCCGTAAAG
GCTGACGCCCGGAGAGTCTT

Downstream 100 bases:

>100_bases
GAAAGATCCTCTTAACGCTACTTTGTGTCAGTTGTGTAACCGCCCAGGCTGCCGATGAAGATATTACTTTCCACGGTACA
CTACTCGCGCCTCCTGTCTG

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRRIFLHRSSVLLTCWVISHLAVAGDMKTVPLTLRVLVDGPPPCTIKGSKVEFGDMIGNNVNGTNYRQDAKYTLNCANSL
ANDLRMQLRGDTWVINGETVLRTDITALGIRIENAADNSLFTIGNNSWTAFNINNQPQLKAVPVKENGAQLATGEFNARL
TMVVDYQ

Sequences:

>Translated_167_residues
MRRIFLHRSSVLLTCWVISHLAVAGDMKTVPLTLRVLVDGPPPCTIKGSKVEFGDMIGNNVNGTNYRQDAKYTLNCANSL
ANDLRMQLRGDTWVINGETVLRTDITALGIRIENAADNSLFTIGNNSWTAFNINNQPQLKAVPVKENGAQLATGEFNARL
TMVVDYQ
>Mature_167_residues
MRRIFLHRSSVLLTCWVISHLAVAGDMKTVPLTLRVLVDGPPPCTIKGSKVEFGDMIGNNVNGTNYRQDAKYTLNCANSL
ANDLRMQLRGDTWVINGETVLRTDITALGIRIENAADNSLFTIGNNSWTAFNINNQPQLKAVPVKENGAQLATGEFNARL
TMVVDYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=156, Percent_Identity=77.5641025641026, Blast_Score=247, Evalue=3e-67,
Organism=Escherichia coli, GI1788675, Length=176, Percent_Identity=32.3863636363636, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18422; Mature: 18422

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIFLHRSSVLLTCWVISHLAVAGDMKTVPLTLRVLVDGPPPCTIKGSKVEFGDMIGNN
CEEEEEECCCCEEHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEECCEEEEHHHCCCC
VNGTNYRQDAKYTLNCANSLANDLRMQLRGDTWVINGETVLRTDITALGIRIENAADNSL
CCCCCCCCCCEEEEEHHHHHHHHEEEEECCCEEEECCCEEEEECEEEEEEEEECCCCCCE
FTIGNNSWTAFNINNQPQLKAVPVKENGAQLATGEFNARLTMVVDYQ
EEEECCCEEEEEECCCCCEEEEEECCCCCEEEECCCCEEEEEEEECC
>Mature Secondary Structure
MRRIFLHRSSVLLTCWVISHLAVAGDMKTVPLTLRVLVDGPPPCTIKGSKVEFGDMIGNN
CEEEEEECCCCEEHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEECCEEEEHHHCCCC
VNGTNYRQDAKYTLNCANSLANDLRMQLRGDTWVINGETVLRTDITALGIRIENAADNSL
CCCCCCCCCCEEEEEHHHHHHHHEEEEECCCEEEECCCEEEEECEEEEEEEEECCCCCCE
FTIGNNSWTAFNINNQPQLKAVPVKENGAQLATGEFNARLTMVVDYQ
EEEECCCEEEEEECCCCCEEEEEECCCCCEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]