Click here to switch to the map view.

The map label for this gene is yoaF [H]

Identifier: 157156904

GI number: 157156904

Start: 2002903

End: 2003157

Strand: Reverse

Name: yoaF [H]

Synonym: EcE24377A_2017

Alternate gene names: 157156904

Gene position: 2003157-2002903 (Counterclockwise)

Preceding gene: 157158378

Following gene: 157158404

Centisome position: 40.23

GC content: 52.16

Gene sequence:

>255_bases
ATGAAAATTATCAGTTTTGCTTTGCCTTGCTTGCTGGTCCTGGCTGGTTGTTCAACCTCTTCTCAGCCAGAAGCACCTAA
ACCGCCGCAGATTGGTATGGCAAATCCGGCGTCGGTCTATTGCCAGCAGAAGGGCGGGACGCTCATTCCAGTGTCGACAG
CGCAAGGGGTCAGCAACAATTGCAAATTACCGGGCGGTGAAACGATTGATGAATGGGCATTGTGGCGACGGGACCATCCG
GCTGGTGAAAAATAA

Upstream 100 bases:

>100_bases
CAAGACGTAATATGTTTTGAGTGAATGTAATAAAAATAGTGCTGCAAAACAAAACGATACCGCGATACTCTAAGCGTAGA
TAAATGAGTGAGATCAATAA

Downstream 100 bases:

>100_bases
CCGCCGGATGCTGTACTAAAATCACAAGCTACGTAGCCAGTCGGCCAGCACCAGCGCATGGTTCTGCGTGGTGTTTTTTG
CTGCGTAGAGCAGGGTCAGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MKIISFALPCLLVLAGCSTSSQPEAPKPPQIGMANPASVYCQQKGGTLIPVSTAQGVSNNCKLPGGETIDEWALWRRDHP
AGEK

Sequences:

>Translated_84_residues
MKIISFALPCLLVLAGCSTSSQPEAPKPPQIGMANPASVYCQQKGGTLIPVSTAQGVSNNCKLPGGETIDEWALWRRDHP
AGEK
>Mature_84_residues
MKIISFALPCLLVLAGCSTSSQPEAPKPPQIGMANPASVYCQQKGGTLIPVSTAQGVSNNCKLPGGETIDEWALWRRDHP
AGEK

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788094, Length=84, Percent_Identity=96.4285714285714, Blast_Score=168, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 8863; Mature: 8863

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIISFALPCLLVLAGCSTSSQPEAPKPPQIGMANPASVYCQQKGGTLIPVSTAQGVSNN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC
CKLPGGETIDEWALWRRDHPAGEK
CCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKIISFALPCLLVLAGCSTSSQPEAPKPPQIGMANPASVYCQQKGGTLIPVSTAQGVSNN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCC
CKLPGGETIDEWALWRRDHPAGEK
CCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]