Click here to switch to the map view.

The map label for this gene is ldrA [H]

Identifier: 157156804

GI number: 157156804

Start: 1359940

End: 1360074

Strand: Reverse

Name: ldrA [H]

Synonym: EcE24377A_1364

Alternate gene names: 157156804

Gene position: 1360074-1359940 (Counterclockwise)

Preceding gene: 157155447

Following gene: 157158274

Centisome position: 27.31

GC content: 53.33

Gene sequence:

>135_bases
ATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGAT
CCTGGCGGGAATTATTACCGCAGCGATTGTCGGCTGGTGGCGTAACCGGAAGTAA

Upstream 100 bases:

>100_bases
TGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTTTAACCTGACAACAGAACGGGGGCTAATCTTGAACCAGAAC
AATTCAAGAATAGCCGCAAA

Downstream 100 bases:

>100_bases
GGTGAAAACGGGCGTCAGGCTGCCGTGATGGCAATATGCGCCCGAAACCGGCCGCAGGGGTAACAGCCTGCGGCCTTTTT
TGTATCTGGCACCCATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MLSLQQGGYMTLAQFAMIFWHDLAAPILAGIITAAIVGWWRNRK

Sequences:

>Translated_44_residues
MLSLQQGGYMTLAQFAMIFWHDLAAPILAGIITAAIVGWWRNRK
>Mature_44_residues
MLSLQQGGYMTLAQFAMIFWHDLAAPILAGIITAAIVGWWRNRK

Specific function: Toxic peptide whose overexpression causes rapid cell killing and nucleoid condensation of the host cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the toxic peptide ldr family [H]

Homologues:

Organism=Escherichia coli, GI48994881, Length=35, Percent_Identity=97.1428571428571, Blast_Score=71, Evalue=1e-14,
Organism=Escherichia coli, GI48994882, Length=35, Percent_Identity=97.1428571428571, Blast_Score=71, Evalue=1e-14,
Organism=Escherichia coli, GI48994880, Length=35, Percent_Identity=97.1428571428571, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4962; Mature: 4962

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLQQGGYMTLAQFAMIFWHDLAAPILAGIITAAIVGWWRNRK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSLQQGGYMTLAQFAMIFWHDLAAPILAGIITAAIVGWWRNRK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]