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The map label for this gene is yebF

Identifier: 157156725

GI number: 157156725

Start: 2057631

End: 2057987

Strand: Reverse

Name: yebF

Synonym: EcE24377A_2077

Alternate gene names: 157156725

Gene position: 2057987-2057631 (Counterclockwise)

Preceding gene: 157156185

Following gene: 157158951

Centisome position: 41.33

GC content: 49.86

Gene sequence:

>357_bases
ATGAAAAAAAGAGGGGCGTTTTTAGGGCTGTTGTTGGTTTCTGCCTGCGCATCAGTTTTCGCTGCCAATAATGAAACCAG
CAAGTCGGTCACTTTCCCAAAGTGTGAAGGTCTGGATGCTGCCGGAATTGCCGCGAGCGTAAAACGTGATTATCAACAAA
ATCGCGTGGCGCGCTGGGCAGATGATCAAAAAATTGTCGGTCAGGCCGATCCCGTGGCTTGGGTCAGTTTGCAGGACATT
CAGGGTAAAGATGATAAATGGTCAGTACCGCTAACCGTGCGTGGTAAAAGTGCCGATATTCATTACCAGGTCAGCGTGGA
CTGCAAAGCGGGAATGGCGGAATATCAGCGGCGTTAA

Upstream 100 bases:

>100_bases
ATCCGAAGAGGAAGATGCCTCACACGCGGCCTGAAGCAACTTGCGCTCCTGACAATTTGTACCATGCTTTCTCCTGAATC
ATTGTGCTATGGAGAAAAAC

Downstream 100 bases:

>100_bases
TGGCTTCTGATAATTCGATTGACCGTTGGCGGATGCGGCGCGAGTGCCTTGTCCGCCCCACAACGCACCACAATCGTAGG
CCTGAGAAGACGCAACAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDI
QGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR

Sequences:

>Translated_118_residues
MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDI
QGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR
>Mature_118_residues
MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDI
QGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yebF family

Homologues:

Organism=Escherichia coli, GI145693150, Length=118, Percent_Identity=99.1525423728814, Blast_Score=239, Evalue=3e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEBF_ECO57 (Q8XCK0)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A85797
- PIR:   E90948
- RefSeq:   NP_288284.1
- RefSeq:   NP_310584.1
- EnsemblBacteria:   EBESCT00000028741
- EnsemblBacteria:   EBESCT00000059461
- GeneID:   914104
- GeneID:   961820
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2899
- KEGG:   ecs:ECs2557
- GeneTree:   EBGT00050000010918
- HOGENOM:   HBG636777
- OMA:   AQVKRDF
- ProtClustDB:   PRK13680
- BioCyc:   ECOL83334:ECS2557-MONOMER
- HAMAP:   MF_01435
- InterPro:   IPR020236
- ProDom:   PD077599

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12904; Mature: 12904

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHCCC
>Mature Secondary Structure
MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796