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The map label for this gene is matA

Identifier: 157156152

GI number: 157156152

Start: 334262

End: 334852

Strand: Reverse

Name: matA

Synonym: EcE24377A_0304

Alternate gene names: 157156152

Gene position: 334852-334262 (Counterclockwise)

Preceding gene: 157156737

Following gene: 157155651

Centisome position: 6.72

GC content: 39.09

Gene sequence:

>591_bases
GTGACATGGCAAAGTGATTACAGTAGGGACTATGAGGTTAAAAACCATATGGAATGTCAAAACCGTTCTGATAAATACAT
CTGGTCTCCCCATGACGCCTACTTCTATAAAGGACTATCTGAACTGATTGTGGATATCGACAGATTAATTTATCTATCGT
TGGAGAAAATTAGAAAAGATTTCGTGTTTATCAATCTCAGTACGGATTCTTTATCTGAATTTATAAACCGTGATAATGAA
TGGTTATCCGCGGTAAAGGGGAAACAGGTCGTATTGATTGCGGCCAGAAAGTCAGAAGCCTTAGCAAATTATTGGTATTA
CAATAGCAATATTAGGGGCGTGGTATACGCTGGACTGAGTCGTGATATTAGAAAAGAACTGGCCTATGTGATTAATGGCA
GGTTCCTGAGAAAAGATATTAAGAAAGATAAAATCACGGACCGGGAAATGGAAATTATCCGCATGACGGCCCAGGGAATG
CAACCTAAATCGATTGCCAGAATTGAAAATTGTAGTGTGAAGACAGTGTATACCCATCGGCGTAATGCTGAGGCCAAGCT
GTACTCAAAAATATATAAGTTGGTTCAGTAA

Upstream 100 bases:

>100_bases
ATCTCGTTTAACCTTTATTGATATGTACTACGTATCTTATTTACTTCCGGTTTACTAAGGAAACTGAATGCACCTGTAAA
AATTACAGGTTTGGAAAGTA

Downstream 100 bases:

>100_bases
ACTCCAGGCAAGTTAGTTTTAAAAAATGACTCACTGGGACATCACGTCCTCAATTCAACTCGGGAAGAAATGCAATGAAA
AAAAAGGTTCTGGCAATAGC

Product: fimbrillin MatA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLSTDSLSEFINRDNE
WLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGM
QPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ

Sequences:

>Translated_196_residues
MTWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLSTDSLSEFINRDNE
WLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGM
QPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ
>Mature_195_residues
TWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLSTDSLSEFINRDNEW
LSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMQ
PKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI2367106, Length=196, Percent_Identity=99.4897959183673, Blast_Score=400, Evalue=1e-113,
Organism=Escherichia coli, GI87082166, Length=172, Percent_Identity=26.1627906976744, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MATA_ECO24 (A7ZI28)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001461457.1
- ProteinModelPortal:   A7ZI28
- SMR:   A7ZI28
- STRING:   A7ZI28
- EnsemblBacteria:   EBESCT00000018847
- GeneID:   5588119
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_0304
- NMPDR:   fig|331111.3.peg.2859
- eggNOG:   COG2771
- GeneTree:   EBGT00050000010503
- HOGENOM:   HBG467214
- OMA:   RDYEVEN
- ProtClustDB:   CLSK2750822
- BioCyc:   ECOL331111:ECE24377A_0304-MONOMER
- GO:   GO:0005737
- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00038
- SMART:   SM00421

Pfam domain/function: PF00196 GerE; SSF46894 Bipartite_resp_reg_C-effector

EC number: NA

Molecular weight: Translated: 23246; Mature: 23115

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00622 HTH_LUXR_1; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKD
CCCCCCCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FVFINLSTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLS
EEEEEECHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCHHHHHHEEECCCCCEEEEECCC
RDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHR
HHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECC
RNAEAKLYSKIYKLVQ
CCCHHHHHHHHHHHHC
>Mature Secondary Structure 
TWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKD
CCCCCCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FVFINLSTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLS
EEEEEECHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCHHHHHHEEECCCCCEEEEECCC
RDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHR
HHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECC
RNAEAKLYSKIYKLVQ
CCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA