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The map label for this gene is yddL [H]

Identifier: 157156070

GI number: 157156070

Start: 1649176

End: 1649466

Strand: Reverse

Name: yddL [H]

Synonym: EcE24377A_1652

Alternate gene names: 157156070

Gene position: 1649466-1649176 (Counterclockwise)

Preceding gene: 157156591

Following gene: 157156437

Centisome position: 33.12

GC content: 41.58

Gene sequence:

>291_bases
ATGAAATTAAAAATAGTTGCGGTGGTTGTAACTGGTTTGTTAGCTGCGAACGTAGCACACGCTGCCGAAGTCTATAACAA
GGATGGTAATAAACTCGACCTTTATGGCAAGGTTACCGCTCTACGTTATTTTACTGATGATAAGCGTGACGATGGTGATA
AAATTTATGCCCGTCTCGGCTTTAAAGGAGAAACGCAAATCAATGATCAAATGATTGGTTTTGGTCACTGGGAATATGAT
TTTAAAGGCTATAACGATGAAGCCAACGGCTCGCGCGGCAACAATCTCTGA

Upstream 100 bases:

>100_bases
ATCACCATTCTATTTTAAAAACAGTATATCATTTATAAATGACGCCGTTTAAAATTCGTTTAGAAAATACGTTTAACGAT
AATTAAAAGGGTTCTGTTAA

Downstream 100 bases:

>100_bases
TTGAGTTAAGTGCCCATCACAATATGATCACTGACCTTATATTACACAATCATCCCAGGATGAAAACAATCACTTTAAAC
GACAACCATATTGCACATTT

Product: outer membrane porin, truncation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKIYARLGFKGETQINDQMIGFGHWEYD
FKGYNDEANGSRGNNL

Sequences:

>Translated_96_residues
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKIYARLGFKGETQINDQMIGFGHWEYD
FKGYNDEANGSRGNNL
>Mature_96_residues
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKIYARLGFKGETQINDQMIGFGHWEYD
FKGYNDEANGSRGNNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788544, Length=87, Percent_Identity=60.9195402298851, Blast_Score=115, Evalue=8e-28,
Organism=Escherichia coli, GI1786436, Length=92, Percent_Identity=53.2608695652174, Blast_Score=107, Evalue=1e-25,
Organism=Escherichia coli, GI1787160, Length=100, Percent_Identity=55, Blast_Score=106, Evalue=3e-25,
Organism=Escherichia coli, GI1787641, Length=89, Percent_Identity=64.0449438202247, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001897
- InterPro:   IPR001702 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 10734; Mature: 10734

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKIYARLG
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEC
FKGETQINDQMIGFGHWEYDFKGYNDEANGSRGNNL
CCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKIYARLG
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEC
FKGETQINDQMIGFGHWEYDFKGYNDEANGSRGNNL
CCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]