| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is 157156048
Identifier: 157156048
GI number: 157156048
Start: 304333
End: 305073
Strand: Reverse
Name: 157156048
Synonym: EcE24377A_0284
Alternate gene names: NA
Gene position: 305073-304333 (Counterclockwise)
Preceding gene: 157155484
Following gene: 157154971
Centisome position: 6.13
GC content: 48.85
Gene sequence:
>741_bases ATGTTTGGAAATGCATTTGGCGTTAAAAAACGCCGCAGCGATGAAGCAGAGAAACCCTTCTGGATCTCCTATGCCGATTT GATGACTGCCATGATGGTGTTATTTCTGGTCGTTATGGTTGCGTCGCTGAGTTCCGTTACGCAGCGTATTCAACGTGCGG AGCAAGGTGAAAAAACACGGGGGCAGGATATTTCCAGATTGTGTGAGCGCCTGGAATTGCATGCCCGCAACGTGAACAAA ACCATTGTGGTGGATTGCCATGATAACCGTATCAGTTTTGGTGAAGCCGGGCGTTTCGATCACAACCAATTTTTCCTGAA CGCTGAGGGGCAAAAAGCCTTGCAGGATGTGGTTCCTCTTGTGCTGGAAGCGTCCAACAGTGAAGAAGGTAAAAAATGGT TTAAGCAGATCGTTATTGAAGGGTTTACCGACACCGACGGTTCGTACTTATACAACCTACATCTCTCCCTGCAACGTTCT GAGTGGGTAATGTGTAGTCTGCTCGATAGCCGCAGCCCTCTGCAAAAAAATATCTCCGCAGAACAGCAGCTCCAAATCCG TAAACTTTTCCTCGCGGGTGGTGTCTCCTTCAATAATGCCAAGGAAAGCAAGGAAGCCAGCCGCCGCGTCGAGTTGCGCA TGCAGTTCTTCGGGCTTAAAGATAAACGTGATAAGGCCGATGAGGTGGATTTCCCCCCCGTCGTCAATAAAGAAGTTTGC CAGTTGGTAATGCCCCTATGA
Upstream 100 bases:
>100_bases GCTTCTACTCTGCTCGCGGGTTCTGTCGAACAGATCGGAGAAAGCGTCAGCGAGCTTGATGATGTCCTGTCACGCGTTCG TGCCTAAGGGGTGACGGCTG
Downstream 100 bases:
>100_bases CGCCTGCACTGAATTCTCTTTCTCAACGCATTGCAGCGAGGCTCTCTTCCAGCCAACGGGATGACCATTATCTGCATAAT GATTTCCACGCGCTGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MFGNAFGVKKRRSDEAEKPFWISYADLMTAMMVLFLVVMVASLSSVTQRIQRAEQGEKTRGQDISRLCERLELHARNVNK TIVVDCHDNRISFGEAGRFDHNQFFLNAEGQKALQDVVPLVLEASNSEEGKKWFKQIVIEGFTDTDGSYLYNLHLSLQRS EWVMCSLLDSRSPLQKNISAEQQLQIRKLFLAGGVSFNNAKESKEASRRVELRMQFFGLKDKRDKADEVDFPPVVNKEVC QLVMPL
Sequences:
>Translated_246_residues MFGNAFGVKKRRSDEAEKPFWISYADLMTAMMVLFLVVMVASLSSVTQRIQRAEQGEKTRGQDISRLCERLELHARNVNK TIVVDCHDNRISFGEAGRFDHNQFFLNAEGQKALQDVVPLVLEASNSEEGKKWFKQIVIEGFTDTDGSYLYNLHLSLQRS EWVMCSLLDSRSPLQKNISAEQQLQIRKLFLAGGVSFNNAKESKEASRRVELRMQFFGLKDKRDKADEVDFPPVVNKEVC QLVMPL >Mature_246_residues MFGNAFGVKKRRSDEAEKPFWISYADLMTAMMVLFLVVMVASLSSVTQRIQRAEQGEKTRGQDISRLCERLELHARNVNK TIVVDCHDNRISFGEAGRFDHNQFFLNAEGQKALQDVVPLVLEASNSEEGKKWFKQIVIEGFTDTDGSYLYNLHLSLQRS EWVMCSLLDSRSPLQKNISAEQQLQIRKLFLAGGVSFNNAKESKEASRRVELRMQFFGLKDKRDKADEVDFPPVVNKEVC QLVMPL
Specific function: Unknown
COG id: COG2885
COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28127; Mature: 28127
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGNAFGVKKRRSDEAEKPFWISYADLMTAMMVLFLVVMVASLSSVTQRIQRAEQGEKTR CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GQDISRLCERLELHARNVNKTIVVDCHDNRISFGEAGRFDHNQFFLNAEGQKALQDVVPL CHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCCCCCEEEEECCHHHHHHHHHHH VLEASNSEEGKKWFKQIVIEGFTDTDGSYLYNLHLSLQRSEWVMCSLLDSRSPLQKNISA HHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCHHHCCCH EQQLQIRKLFLAGGVSFNNAKESKEASRRVELRMQFFGLKDKRDKADEVDFPPVVNKEVC HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH QLVMPL HHHCCC >Mature Secondary Structure MFGNAFGVKKRRSDEAEKPFWISYADLMTAMMVLFLVVMVASLSSVTQRIQRAEQGEKTR CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GQDISRLCERLELHARNVNKTIVVDCHDNRISFGEAGRFDHNQFFLNAEGQKALQDVVPL CHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCCCCCEEEEECCHHHHHHHHHHH VLEASNSEEGKKWFKQIVIEGFTDTDGSYLYNLHLSLQRSEWVMCSLLDSRSPLQKNISA HHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCHHHCCCH EQQLQIRKLFLAGGVSFNNAKESKEASRRVELRMQFFGLKDKRDKADEVDFPPVVNKEVC HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH QLVMPL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA