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The map label for this gene is yhcH

Identifier: 157155045

GI number: 157155045

Start: 3699144

End: 3699608

Strand: Reverse

Name: yhcH

Synonym: EcE24377A_3703

Alternate gene names: 157155045

Gene position: 3699608-3699144 (Counterclockwise)

Preceding gene: 157155309

Following gene: 157156653

Centisome position: 74.3

GC content: 47.31

Gene sequence:

>465_bases
ATGATGATGGGTGAAGTACAGTCATTACCGTCTGCTGGGTTACATCCTGCGTTACAGGACGCGTTAACGCTGGCATTAGC
TGCCAGACCGCAAGAAAAAGCGCCGGGTCGTTACGAATTACAGGGCGACAATATCTTTATGAATGTCATGACGTTTAACA
CTCAATCGCCCGTCGAGAAAAAAGCGGAATTGCACGAGCAATACATTGATATCCAACTGTTATTAAACGGTGAGGAACGG
ATTCTGTTTGGCATGGCAGGCACTGCGCGCCAGTGTGAAGAGTTCCACCATGAGGATGATTATCAGCTTTGCAGCACCAT
TGATAACGAGCAAGCCATCATCTTAAAACCGGGAATGTTCGCCGTGTTTATGCCAGGTGAACCGCATAAACCAGGATGCG
TTGTCGGCGAGCCTGGAGAGATTAAAAAGGTTGTGGTGAAGGTTAAGGCTGATTTAATGGCTTAA

Upstream 100 bases:

>100_bases
CGCAGGAGCCAGCGGCATTTCATGTTGATTTACTGGCGGCGCACTACCGCCACGATGCAGGTTTACTTGGGGCTGCGCTG
TTGGCCCAGGGAGAAAAATT

Downstream 100 bases:

>100_bases
AACTTAGTTCGTTTTAAAGATTCTGCAGACACTGTCTGCAGAATTCGAAACCGCTGAAATTAACGGCGTCTATAGCCTTC
CTCTAGCACCGCCTGTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEER
ILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMFAVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA

Sequences:

>Translated_154_residues
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEER
ILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMFAVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA
>Mature_154_residues
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEER
ILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMFAVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0227

Homologues:

Organism=Escherichia coli, GI1789615, Length=154, Percent_Identity=100, Blast_Score=318, Evalue=8e-89,
Organism=Escherichia coli, GI1790001, Length=149, Percent_Identity=31.5436241610738, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI87082398, Length=148, Percent_Identity=30.4054054054054, Blast_Score=80, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHCH_ECOLI (P45424)

Other databases:

- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   G65113
- RefSeq:   AP_003763.1
- RefSeq:   NP_417688.1
- ProteinModelPortal:   P45424
- SMR:   P45424
- IntAct:   P45424
- STRING:   P45424
- EnsemblBacteria:   EBESCT00000004411
- EnsemblBacteria:   EBESCT00000014556
- GeneID:   947750
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3190
- KEGG:   eco:b3221
- EchoBASE:   EB2665
- EcoGene:   EG12814
- eggNOG:   COG2731
- GeneTree:   EBGT00050000009310
- HOGENOM:   HBG698441
- OMA:   EENDFYL
- ProtClustDB:   CLSK880621
- BioCyc:   EcoCyc:G7675-MONOMER
- Genevestigator:   P45424
- InterPro:   IPR004375
- Gene3D:   G3DSA:2.60.120.370
- TIGRFAMs:   TIGR00022

Pfam domain/function: PF04074 DUF386

EC number: NA

Molecular weight: Translated: 17038; Mature: 17038

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEEEECCCCCHHH
KAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMF
HHHHHHHHEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCHHHHHCCCCCCEEEECCCEE
AVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA
EEEECCCCCCCCEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEEEECCCCCHHH
KAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMF
HHHHHHHHEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCHHHHHCCCCCCEEEECCCEE
AVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA
EEEECCCCCCCCEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503