| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is yagX [H]
Identifier: 157154909
GI number: 157154909
Start: 330323
End: 332848
Strand: Reverse
Name: yagX [H]
Synonym: EcE24377A_0301
Alternate gene names: 157154909
Gene position: 332848-330323 (Counterclockwise)
Preceding gene: 157159226
Following gene: 157158770
Centisome position: 6.68
GC content: 55.34
Gene sequence:
>2526_bases ATGCCTTTACGACGGTTCTCCCCAGGACTGAAAGCCCAGTTTGCCTTCGGCATGGTCTTTTTGTTCGTTCAGCCCGATGC CAGCGCTGCTGACATAAGTGCGCAGCAAATAGGTGGGGTGATTATTCCGCAGGCCTTCAGTCAGGCGCTTCAGGACGGCA TGAGCGTCCCGCTCTATATTCATCTCGCCGGTAGCCAGGGTCGCCAGGACGATCAGCGAATCGGCAGCGCTTTTATCTGG CTGGACGATGGACAGCTACGCATCCGGAAAATACAGCTGGAAGAGAGTGAAGATAACGCCAGTGTCAGCGAACAAACTCG ACAGCAGCTGATGGCTCTGGCGAACGCCCCGTTCAATGAGGCCCTTACCATCCCCCTGACTGACAACGCGCAGCTGGATC TCAGCTTGCGCCAACTGCTGCTGCAGCTGGTGGTCAAGCGCGAAGCGCTGGGCACCGTACTACGCTCACGTAGCGAAGAC ATCGGGCAGTCCAGTGTTAACACCCTCAGCAGTAATCTGAGCTATAACTTGGGCGTCTATAACAACCAGTTGCGTAACGG CGGGAGCAACACATCCAGCTATCTGTCGCTGAATAACGTTACTGCACTGCGCGAACATCATGTGGTGCTCGACGGCTCGC TGTACGGGATCGGTAGCGGTCAACAGGACAGTGAATTATATAAAGCGATGTATGAACGCGATTTTGCCGGTCACCGATTT GCCGGTGGAATGCTCGACACCTGGAACTTGCAGTCCTTAGGGCCGATGACCGCCATTTCAGCAGGGAAGATTTACGGCCT TTCCTGGGGAAACCAGGCCAGCTCCACCATCTTCGACAGCAGCCAGTCAGCCACGCCAGTGATCGCCTTTTTACCGGCGG CGGGCGAAGTACATCTCACCCGTGATGGGCGGCTACTAAGCGTTCAGAACTTCACTATGGGCAATCATGAAGTGGATACC CGGGGTCTACCGTACGGGATTTACGATGTGGAAGTTGAGGTGATCGTTAACGGTCGCGTGATCAGCAAACGCACCCAGCG GGTCAATAAGCTGTTTAGCCGGGGGCGCGGCGTCGGTGCACCACTGGCGTGGCAGGTATGGGGCGGTAGCTTTCATATGG ATCGCTGGTCGGAAAACGGGAAAAAGACGCGACCAGCTAAAGAGAGTTGGCTAGCAGGTGCCTCGACCTCCGGCTCATTG AGTACGCTTAGCTGGGCGGCAACGGGATATGGATACGATAATCAGGCGGTGGGTGAAACCCGTCTGACGCTGCCGCTTGG GGGGGCGATCAACGTTAACCTGCAAAATATGCTGGCCAGTGACAGCTCATGGAGCAGCATCGGCAGCATCAGCGCCACTC TACCGGGAGGCTTTAGTTCGCTGTGGGTTAATCAGGAAAAAACCCGCATTGGCAATCAATTGCGACGTAGCGATGCCGAC AACCGTGCAATCGGCGGCACACTCAACCTGAACTCACTGTGGTCGAAGCTGGGCACATTCAGCATCAGCTACAATGATGA CCGCCGTTACAACAGCCATTATTACACGGCAGATTACTATCAAAATGTCTACAGCGGTACCTTTGGTTCGCTTGGCCTGC GGGCCGGTATTCAGCGCTATAACAACGGCGACAGCAACGCCAATACAGGGAAATATATCGCTCTCGATCTCTCGCTACCA CTGGGCAACTGGTTTAGCGCAGGGATGACTCATCAAAACGGCTACACCATGGCAAACCTGTCAGCACGCAAACAGTTTGA TGAAGGAACCATTCGCACTGTTGGTGCCAATCTGTCACGTGCCATCTCCGGCGATACCGGTGATGACAAAACCCTCAGCG GTGGGGCGTATGCACAATTCGACGCTCGTTACGCCAGCGGAACGCTGAACGTCAATAGCGCGGCGGACGGCTACGTCAAT ACCAACTTGACCGCCAATGGCAGCGTCGGCTGGCAGGGTAAAAACATTGCTGCCAGCGGGCGGACTGATGGCAACGCTGG GGTGATATTCAACACCGGGCTGGAGGACGACGGTCAGATCAGCGCCAAAATCAACGGGCGGATTTTCCCGCTTAACGGCA AGCGTAACTATCTCCCGCTCTCTCCCTATGGAAGATATGAAGTGGAGTTACAGAACAGCAAAAACTCACTCGACAGCTAC GATATCGTCAGCGGCCGCAAAAGCCATCTGACTCTCTATCCAGGCAATGTCGCTGTCATTGAGCCAGAGGTGAAGCAGAT GGTTACCGTCTCCGGTCGTATCCGTGCGGAAGACGGCACACTGCTGGCTAACGCACGGATTAACAACCATATCGGCCGAA CCCGAACCGATGAAAACGGCGAGTTTGTCATGGACGTGGATAAGAAATACCCCACTATCGATTTTCGCTACAGTGGCAAT AAAACCTGCGAAGTGGCACTGGAACTCAGCCAGGCGCGCGGTGCCGTCTGGGTCGGTGATGTGGTCTGCAGCGGCCTCTC ATCGTGGGCGGCGGTGACGCAGACAGGAGAAGAGAATGAGAGTTAA
Upstream 100 bases:
>100_bases ACCCGCGTGGACACGGCGGATAACAAAGGACGGGTTGCACTTTGGCAGGGTGATAAGTTCATTCCCGTGAAATAGATAGC TGTGCAGATGGATAACGACA
Downstream 100 bases:
>100_bases CCTACTGATAGCGATGATAATCTTCGCGCTAATCTGGCCAGTAACCGCGCTCAGAGCGGCAGTGAGCAAAACAACCTGGG CGGATGCACCGGCAAGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 841; Mature: 840
Protein sequence:
>841_residues MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYIHLAGSQGRQDDQRIGSAFIW LDDGQLRIRKIQLEESEDNASVSEQTRQQLMALANAPFNEALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSED IGQSSVNTLSSNLSYNLGVYNNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRF AGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFTMGNHEVDT RGLPYGIYDVEVEVIVNGRVISKRTQRVNKLFSRGRGVGAPLAWQVWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSL STLSWAATGYGYDNQAVGETRLTLPLGGAINVNLQNMLASDSSWSSIGSISATLPGGFSSLWVNQEKTRIGNQLRRSDAD NRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQNVYSGTFGSLGLRAGIQRYNNGDSNANTGKYIALDLSLP LGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSRAISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYVN TNLTANGSVGWQGKNIAASGRTDGNAGVIFNTGLEDDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSY DIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFRYSGN KTCEVALELSQARGAVWVGDVVCSGLSSWAAVTQTGEENES
Sequences:
>Translated_841_residues MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYIHLAGSQGRQDDQRIGSAFIW LDDGQLRIRKIQLEESEDNASVSEQTRQQLMALANAPFNEALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSED IGQSSVNTLSSNLSYNLGVYNNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRF AGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFTMGNHEVDT RGLPYGIYDVEVEVIVNGRVISKRTQRVNKLFSRGRGVGAPLAWQVWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSL STLSWAATGYGYDNQAVGETRLTLPLGGAINVNLQNMLASDSSWSSIGSISATLPGGFSSLWVNQEKTRIGNQLRRSDAD NRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQNVYSGTFGSLGLRAGIQRYNNGDSNANTGKYIALDLSLP LGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSRAISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYVN TNLTANGSVGWQGKNIAASGRTDGNAGVIFNTGLEDDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSY DIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFRYSGN KTCEVALELSQARGAVWVGDVVCSGLSSWAAVTQTGEENES >Mature_840_residues PLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYIHLAGSQGRQDDQRIGSAFIWL DDGQLRIRKIQLEESEDNASVSEQTRQQLMALANAPFNEALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSEDI GQSSVNTLSSNLSYNLGVYNNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRFA GGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFTMGNHEVDTR GLPYGIYDVEVEVIVNGRVISKRTQRVNKLFSRGRGVGAPLAWQVWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSLS TLSWAATGYGYDNQAVGETRLTLPLGGAINVNLQNMLASDSSWSSIGSISATLPGGFSSLWVNQEKTRIGNQLRRSDADN RAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQNVYSGTFGSLGLRAGIQRYNNGDSNANTGKYIALDLSLPL GNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSRAISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYVNT NLTANGSVGWQGKNIAASGRTDGNAGVIFNTGLEDDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSYD IVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFRYSGNK TCEVALELSQARGAVWVGDVVCSGLSSWAAVTQTGEENES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli plasmid NTP513 CFA fimbria subunit C (CfaC) [H]
Homologues:
Organism=Escherichia coli, GI1786484, Length=841, Percent_Identity=99.7621878715815, Blast_Score=1707, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008969 - InterPro: IPR014766 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91183; Mature: 91052
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYI CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHCCEECHHHHHHHHHCCCCCCEEE HLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASVSEQTRQQLMALANAPFNE EECCCCCCCHHHHHCEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC ALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNTLSSNLSYNLGVY EEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCCEEEECCC NNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRF CCHHCCCCCCCCCEEEECCEEEEECCEEEEECEEEECCCCCCHHHHHHHHHHCCCCCCEE AGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLT CCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCEEECCCCCCCCEEEEECCCCEEEEE RDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEVIVNGRVISKRTQRVNKLFSRGRGVGA CCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCEEEHHHHHHHHHHHHCCCCCCC PLAWQVWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSLSTLSWAATGYGYDNQAVGET CEEEEEECCEEECCHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCE RLTLPLGGAINVNLQNMLASDSSWSSIGSISATLPGGFSSLWVNQEKTRIGNQLRRSDAD EEEEEECCEEEEEHHHHHCCCCCCCCCCCEEEECCCCCHHEEECCHHHHHHHHHHHCCCC NRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQNVYSGTFGSLGLRAGIQRY CCCCCCEEEHHHHHHHHCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHC NNGDSNANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSR CCCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCEEEEECHHHHCCCCCCEEEECCCCHH AISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYVNTNLTANGSVGWQGKNIAASG HCCCCCCCCCEECCCCEEEEECEECCCEEEECCCCCCEEECCEEECCCCCCCCCEEEECC RTDGNAGVIFNTGLEDDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSY CCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCEECCCCCCCEEEEECCCCCCCCCE DIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENG EECCCCCCEEEEECCCEEEECHHHHEEEEECCEEEECCCCEEEECEECCCCCCCCCCCCC EFVMDVDKKYPTIDFRYSGNKTCEVALELSQARGAVWVGDVVCSGLSSWAAVTQTGEENE CEEEEECCCCCEEEEEECCCCEEEEEEEEHHCCCCEEEHHHHHCCHHHHHHHCCCCCCCC S C >Mature Secondary Structure PLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYI CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHCCEECHHHHHHHHHCCCCCCEEE HLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASVSEQTRQQLMALANAPFNE EECCCCCCCHHHHHCEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC ALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNTLSSNLSYNLGVY EEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCCEEEECCC NNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRF CCHHCCCCCCCCCEEEECCEEEEECCEEEEECEEEECCCCCCHHHHHHHHHHCCCCCCEE AGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLT CCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCEEECCCCCCCCEEEEECCCCEEEEE RDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEVIVNGRVISKRTQRVNKLFSRGRGVGA CCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCEEEHHHHHHHHHHHHCCCCCCC PLAWQVWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSLSTLSWAATGYGYDNQAVGET CEEEEEECCEEECCHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCE RLTLPLGGAINVNLQNMLASDSSWSSIGSISATLPGGFSSLWVNQEKTRIGNQLRRSDAD EEEEEECCEEEEEHHHHHCCCCCCCCCCCEEEECCCCCHHEEECCHHHHHHHHHHHCCCC NRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQNVYSGTFGSLGLRAGIQRY CCCCCCEEEHHHHHHHHCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHC NNGDSNANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSR CCCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCEEEEECHHHHCCCCCCEEEECCCCHH AISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYVNTNLTANGSVGWQGKNIAASG HCCCCCCCCCEECCCCEEEEECEECCCEEEECCCCCCEEECCEEECCCCCCCCCEEEECC RTDGNAGVIFNTGLEDDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSY CCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCEECCCCCCCEEEEECCCCCCCCCE DIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENG EECCCCCCEEEEECCCEEEECHHHHEEEEECCEEEECCCCEEEECEECCCCCCCCCCCCC EFVMDVDKKYPTIDFRYSGNKTCEVALELSQARGAVWVGDVVCSGLSSWAAVTQTGEENE CEEEEECCCCCEEEEEECCCCEEEEEEEEHHCCCCEEEHHHHHCCHHHHHHHCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]