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The map label for this gene is yijF

Identifier: 157163421

GI number: 157163421

Start: 4165673

End: 4166290

Strand: Reverse

Name: yijF

Synonym: EcHS_A4178

Alternate gene names: 157163421

Gene position: 4166290-4165673 (Counterclockwise)

Preceding gene: 157163422

Following gene: 157163415

Centisome position: 89.72

GC content: 52.59

Gene sequence:

>618_bases
ATGAAAGCTTCACTGGCGCTGCTCAGCCTGCTAACGGCATTTACCAGCCACTCCTTAAAATCTCCCGCCGTTCCACCAAC
CGTGGTACAAATCCAGGCCAATACCAACCTTGCCATCGCAGACGGTGCCAGACAGCAAATTGGCAGCACGCTATTTTACG
ATCCGGCGTATGTGCAGCTTACTTATCCTGGCGGTGATGTTCCGCAAGAACGCGGTGTATGTTCCGATGTGGTGATCCGC
GCATTGCGCAGCCAGAAGGTCGATTTGCAGAAACTGGTTCACGAAGATATGGCGAAGAATTTTGCTGAGTACCCGCAAAA
ATGGAAGTTAAAGCGCCCGGACAGCAACATCGATCACCGTCGGGTGCCTAATCTGGAAACCTGGTTTAGCCGCCATGATA
AAACACGCCCCACCAGCAAGAACCCCAGTGACTATCAAGCGGGCGATATTGTCTCCTGGCGACTGGATAACGGGCTGGCA
CATATTGGGGTGGTTTCAGATGGCTTCGCCCGCGACGGTACGCCGCTGGTGATACATAACATTGGCGCAGGCGCGCAGGA
AGAAGATGTGCTGTTTAACTGGCGGATGGTGGGGCATTATCGTTATTTTGTTAAATAA

Upstream 100 bases:

>100_bases
TGTTCAGGAATTTTTTATCCGCTTCTGGACATTTTCTCTACAGAACAATCGTTAGCCCGGAAGGTCGAATCTGTGACTCT
TATTTTCACGGACGAACCAG

Downstream 100 bases:

>100_bases
GAGATCGCCCCACATGAAGAAAAAATTCAGATCCTTTTTACACTGACGGCTTCTTTTTTCTTACGGCTCACCAGCGCCAG
TGCCAGCACAATCAGCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIR
ALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLA
HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK

Sequences:

>Translated_205_residues
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIR
ALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLA
HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK
>Mature_205_residues
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIR
ALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLA
HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK

Specific function: Unknown

COG id: COG3738

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790380, Length=205, Percent_Identity=100, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIJF_ECOLI (P32668)

Other databases:

- EMBL:   U00006
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   I78665
- RefSeq:   AP_003865.1
- RefSeq:   NP_418379.1
- STRING:   P32668
- EnsemblBacteria:   EBESCT00000001043
- EnsemblBacteria:   EBESCT00000015367
- GeneID:   948441
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3916
- KEGG:   eco:b3944
- EchoBASE:   EB1848
- EcoGene:   EG11903
- eggNOG:   COG3738
- GeneTree:   EBGT00050000011948
- HOGENOM:   HBG425886
- OMA:   PGNLPHI
- ProtClustDB:   CLSK866654
- BioCyc:   EcoCyc:EG11903-MONOMER
- Genevestigator:   P32668
- InterPro:   IPR009706
- PIRSF:   PIRSF011444
- ProDom:   PD357862

Pfam domain/function: PF06940 DUF1287

EC number: NA

Molecular weight: Translated: 22955; Mature: 22955

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCHHHHCCEEEECCEEEEE
TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR
ECCCCCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC
RVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCEEEEE
IGAGAQEEDVLFNWRMVGHYRYFVK
CCCCCCCCCEEEEEEEEEEEEEEEC
>Mature Secondary Structure
MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCHHHHCCEEEECCEEEEE
TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR
ECCCCCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC
RVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCEEEEE
IGAGAQEEDVLFNWRMVGHYRYFVK
CCCCCCCCCEEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503