| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is 157163412
Identifier: 157163412
GI number: 157163412
Start: 4155289
End: 4155912
Strand: Reverse
Name: 157163412
Synonym: EcHS_A4169
Alternate gene names: NA
Gene position: 4155912-4155289 (Counterclockwise)
Preceding gene: 157163413
Following gene: 157163410
Centisome position: 89.5
GC content: 46.96
Gene sequence:
>624_bases ATGAAAAAAATAATTCCCGCCGTAGTCTGTTTGTTGCTTTGTAGTTGCTCGACCTTTCCGCAAGCTGTCGCTCCGGTAAA CAATGACTTTGCAGGTCAGCATAATATTTATATTGTCAGTCACGGCTGGCATACCGGAATTGTGGTGCCCGCCGCAATCG TTAATCGTGTTTTACCGCAACTCGACGCGAGATTTGCGCAACCAAAATGGTATGAAATCGGCTGGGGCGATAAAGGCTTT TATCAGGCACAGGAAATTACCAGTCGCCTGACATTGCAGGCGATGTTCTGGTCTACTGGCGCAGTAATGCATGTGGTGGC GTTCTCTGCCCCACCTGAACGCTATTTTCCTGGCAGTGAAGTTAAGCCACTGACAATTAACAACGGTCAACTTGCGACCT TAATGCTATTTATTGGCCGCAGTTTTTCCCGTAGCGAGGCGGGAAATGTTATTCCACTCAAAAAAGGCATTTATGGTGAC AGCCAGTTTTATGCCGCCAATGGTCGCTATGGGATTTTAAATACCTGTAATAAATGGACGGCAAAAGGGTTACAAAGCGC GGGGATAGAGATTGAACCGGCTTTAAAATTGACGGCGGGGAGTGTGATAAGCGCAATGCCTTAA
Upstream 100 bases:
>100_bases TCCGCTTGAGGAAACGGTAGTTTCACCACAAGCCGTTTTCGACGCGCCACAACTCACCACAGTCGCCAAAGAGTGGCCGC TGTTTTCGTGGTAATGGATG
Downstream 100 bases:
>100_bases CGATTGTCAGGCACAAAAAAAGCGCCGTGCGGCGCTTTTTTCGGAAATCCGGTCTTATTTGCTGCCCGGGATGTTGAAAC GCTTGTTGAAGCGGTCAACA
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKKIIPAVVCLLLCSCSTFPQAVAPVNNDFAGQHNIYIVSHGWHTGIVVPAAIVNRVLPQLDARFAQPKWYEIGWGDKGF YQAQEITSRLTLQAMFWSTGAVMHVVAFSAPPERYFPGSEVKPLTINNGQLATLMLFIGRSFSRSEAGNVIPLKKGIYGD SQFYAANGRYGILNTCNKWTAKGLQSAGIEIEPALKLTAGSVISAMP
Sequences:
>Translated_207_residues MKKIIPAVVCLLLCSCSTFPQAVAPVNNDFAGQHNIYIVSHGWHTGIVVPAAIVNRVLPQLDARFAQPKWYEIGWGDKGF YQAQEITSRLTLQAMFWSTGAVMHVVAFSAPPERYFPGSEVKPLTINNGQLATLMLFIGRSFSRSEAGNVIPLKKGIYGD SQFYAANGRYGILNTCNKWTAKGLQSAGIEIEPALKLTAGSVISAMP >Mature_207_residues MKKIIPAVVCLLLCSCSTFPQAVAPVNNDFAGQHNIYIVSHGWHTGIVVPAAIVNRVLPQLDARFAQPKWYEIGWGDKGF YQAQEITSRLTLQAMFWSTGAVMHVVAFSAPPERYFPGSEVKPLTINNGQLATLMLFIGRSFSRSEAGNVIPLKKGIYGD SQFYAANGRYGILNTCNKWTAKGLQSAGIEIEPALKLTAGSVISAMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22533; Mature: 22533
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIPAVVCLLLCSCSTFPQAVAPVNNDFAGQHNIYIVSHGWHTGIVVPAAIVNRVLPQ CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHH LDARFAQPKWYEIGWGDKGFYQAQEITSRLTLQAMFWSTGAVMHVVAFSAPPERYFPGSE HHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCCCC VKPLTINNGQLATLMLFIGRSFSRSEAGNVIPLKKGIYGDSQFYAANGRYGILNTCNKWT CCEEEECCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEECCCCCHHH AKGLQSAGIEIEPALKLTAGSVISAMP HHHHHHCCCEECCCEEEECCCHHHCCC >Mature Secondary Structure MKKIIPAVVCLLLCSCSTFPQAVAPVNNDFAGQHNIYIVSHGWHTGIVVPAAIVNRVLPQ CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHH LDARFAQPKWYEIGWGDKGFYQAQEITSRLTLQAMFWSTGAVMHVVAFSAPPERYFPGSE HHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCCCC VKPLTINNGQLATLMLFIGRSFSRSEAGNVIPLKKGIYGDSQFYAANGRYGILNTCNKWT CCEEEECCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEECCCCCHHH AKGLQSAGIEIEPALKLTAGSVISAMP HHHHHHCCCEECCCEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA