| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is ygfJ [H]
Identifier: 157162338
GI number: 157162338
Start: 3042674
End: 3043252
Strand: Direct
Name: ygfJ [H]
Synonym: EcHS_A3037
Alternate gene names: 157162338
Gene position: 3042674-3043252 (Clockwise)
Preceding gene: 157162335
Following gene: 157162339
Centisome position: 65.52
GC content: 42.83
Gene sequence:
>579_bases ATGTCAGCCATCGACTGTATAATTACCGCCGCCGGATTATCATCAAGAATGGGGCAATGGAAAATGATGTTACCCTGGCA ACAGGGAACAATTCTTGATACAAGTATCAAAAATGCGTTGCAGTTTTGTAGCCGAATTATTTTAGTCACCGGCTATCGTG GTAATGAACTGCACGAACGTTATGCGAACCAGAGTAATATCACTATTATTCACAACCCAGATTATGCCCAGGGTTTACTA ACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCAT TGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGA TTTTAGTGTCAAAACCATGCTTGATGCAGGCATTCCAGCGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGA GATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGAA AAGGTATACTGAAATTTAG
Upstream 100 bases:
>100_bases GTCTTTATGACCTCTCTGGGATAAATTACCCCCAACTTAATCCAACAGGAAGTAACGCAATTATCAGGCGTTATTAGCCC CTATAAATAATGGAACCACT
Downstream 100 bases:
>100_bases AAAATGTAGTTAAACGATTGCGTTCAAATATTTAACCCCTCCAGCACTCTTTATCATAATGATAAGGAATCACTGATTTT GAGAAAAGAGAAAAAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLL TSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAFQRPNVTNMRQALLMG DHYSVEIENAEIILDIDTPDDFITAKKRYTEI
Sequences:
>Translated_192_residues MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLL TSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAFQRPNVTNMRQALLMG DHYSVEIENAEIILDIDTPDDFITAKKRYTEI >Mature_191_residues SAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLT SVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAFQRPNVTNMRQALLMGD HYSVEIENAEIILDIDTPDDFITAKKRYTEI
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789242, Length=192, Percent_Identity=98.4375, Blast_Score=397, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017696 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21546; Mature: 21415
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER CCHHHHEEECCCHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHEEEEECCCCCHHHHH YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCC AILPLHNGIPGHPILVSKPCLMQAFQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPD EEEEECCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCC DFITAKKRYTEI HHHHHHHHHCCC >Mature Secondary Structure SAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER CHHHHEEECCCHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHEEEEECCCCCHHHHH YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCC AILPLHNGIPGHPILVSKPCLMQAFQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPD EEEEECCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCC DFITAKKRYTEI HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]