Click here to switch to the map view.

The map label for this gene is yqeI [H]

Identifier: 157162300

GI number: 157162300

Start: 3006823

End: 3007632

Strand: Direct

Name: yqeI [H]

Synonym: EcHS_A2994

Alternate gene names: 157162300

Gene position: 3006823-3007632 (Clockwise)

Preceding gene: 157162299

Following gene: 157162301

Centisome position: 64.75

GC content: 39.63

Gene sequence:

>810_bases
ATGTACTGGATTATTAACGATAATATCGAGTTCTGGCCTGAGCACCGAAAATTAATATCGGTACATAACGCCGATCTTAA
CGTCGTTCTGACAACGCCAGCCAGTCGATGTTTATCACTTCTACTTGAAGCTTTTCCTGATGTGGTTGCACAACAAGATT
TTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAGACGC
GGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAAGATCCATAATGACAT
TAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGG
GATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTG
AGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAA
GATTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGAAAGAGTTCGATAAATATA
AAACACGGATACTGGATTCGGGGATTAACTGTAAAAAACATCCGTGGTTATACTTCCCTCTTGCAAAATCCTCACCGGGG
ATGATTGTTATGGCATGCAATAAAAACTATAACCAACATGAAGTGGCAGACTGTTTAACCCTGTCTTACCGTGAGGTTAA
TCGTGATTGA

Upstream 100 bases:

>100_bases
CATGATAAATATAAAATTAATATATATTTATGCCGTAAATACCAATATACTTAGCAAACTATGTGATCTCCATTTCGATT
GATTTAGTGTTTATTGACGT

Downstream 100 bases:

>100_bases
TTATAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACACTGCAGAAAA
AATGATATATAACGAAACAT

Product: transcriptional regulatory protein, C terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRR
GFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIML
SAFVIGAYSAYWLWNNNQPKPFFKDYKIVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPG
MIVMACNKNYNQHEVADCLTLSYREVNRD

Sequences:

>Translated_269_residues
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRR
GFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIML
SAFVIGAYSAYWLWNNNQPKPFFKDYKIVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPG
MIVMACNKNYNQHEVADCLTLSYREVNRD
>Mature_269_residues
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRR
GFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIML
SAFVIGAYSAYWLWNNNQPKPFFKDYKIVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPG
MIVMACNKNYNQHEVADCLTLSYREVNRD

Specific function: Unknown

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.cholerae cholera toxin transcriptional activator (toxR) [H]

Homologues:

Organism=Escherichia coli, GI1789213, Length=269, Percent_Identity=99.2565055762082, Blast_Score=560, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 30864; Mature: 30864

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWE
CEEEECCCCEECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDA
HCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHEEECCCCCC
HTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIMLSAFVIGAYSAYWLWNNNQPK
CCCCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
PFFKDYKIVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPG
CHHHCEEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
MIVMACNKNYNQHEVADCLTLSYREVNRD
EEEEEECCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWE
CEEEECCCCEECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDA
HCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHEEECCCCCC
HTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIMLSAFVIGAYSAYWLWNNNQPK
CCCCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
PFFKDYKIVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPG
CHHHCEEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
MIVMACNKNYNQHEVADCLTLSYREVNRD
EEEEEECCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]