| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
Click here to switch to the map view.
The map label for this gene is yfeW [H]
Identifier: 157161896
GI number: 157161896
Start: 2575520
End: 2576824
Strand: Direct
Name: yfeW [H]
Synonym: EcHS_A2566
Alternate gene names: 157161896
Gene position: 2575520-2576824 (Clockwise)
Preceding gene: 157161895
Following gene: 157161897
Centisome position: 55.46
GC content: 51.8
Gene sequence:
>1305_bases ATGAAACGGACAATGCTCTATCTTTCTCTGCTGGCTGTTAGTTGTAGCGTCAGCGCCGCAAAATACCCTGTTCTGACAGA AAGCTCGCCAGAGAAAGCAGGGTTTAACGTCGAACGGCTTAACCAGATGGATCGCTGGATTAGCCAGCAAGTTGATGTCG GTTATCCCGGCGTAAACCTGCTGATCATTAAAGATAATCAGATTGTGTATCGCAAAGCCTGGGGAGCGGCGAAAAAGTAC GATGGCAGCGTGTTGATGGAACAGCCTGTCAAAGCCACCACCGGGACGCTGTATGACCTGGCCTCAAACACCAAAATGTA CGCCACGAACTTCGCCCTGCAAAAGCTGATGAGCGAAGGCAAACTGCATCCTGACGATCGGATTGCGAAATATATTCCGG GGTTTGCCGATAGTCCAAATGACACCATTAAAGGCAAAAACACCCTGCGGATTTCTGACCTGCTGCATCACAGCGGCGGT TTCCCGGCAGATCCGCAATACCCGAATAAAGCGGTCGCGGGCGCGTTATATTACCAGGATAAAGGCCAGACGCTGGAGAT GATCAAGCGCACGCCGCTAGAGTATCAGCCCGGCAGCAAGCATATTTACAGTGATGTCGATTATATGCTGCTTGGATTTA TCGTCGAGTCGGTCACCGGTCAGCCGCTTGACCGCTATGTTGAAGAGTCGATTTATCGCCCGCTCGGCCTGACACATACG GTATTTAACCCGCTGCTGAAAGGCTTTAAACCGCAACAAATTGCCGCCACGGAATTGAACGGCAATACCCGCGATGGCGT GATCCATTTCCCGAATATCCGCACCTCCACTCTCTGGGGTCAGGTGCACGATGAAAAAGCCTTTTATTCGATGGGCGGCG TTTCCGGGCACGCAGGTTTGTTTTCCAATACCGGCGATATTGCGGTGTTAATGCAAACGATGCTGAACGGCGGGGGCTAT GGTGATGTGCAGCTGTTCAATGCGGAAACGGTGAAGATGTTCACCACCAGCTCTAAGGAAGATGCCACTTTTGGCCTCGG CTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCT GGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGGCGATTGTGATGTTAAGCAACAAGCCACATTCTCCAGTT GCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGT GTATGCGGCGTTAAAGCAGAAGTAA
Upstream 100 bases:
>100_bases GCCATGGCGGTTTATGCTGGCGGGATTCTGGTGGCATGGGTTTGCGGGTTTATTTTCACCACGCTCTTTGGCTGCCGTAA CGTCAATCTGGACTGATATC
Downstream 100 bases:
>100_bases TAAAAAGGCCAGTCAGTAATGTTACTGGCTGGTCTGAGAGTGCTGACAAACGCAAAACTGCCTGATGCGCTACGCTTATC AGGCCTTGTATTATCCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPGVNLLIIKDNQIVYRKAWGAAKKY DGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGG FPADPQYPNKAVAGALYYQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHT VFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGY GDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPHSPV ADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK
Sequences:
>Translated_434_residues MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPGVNLLIIKDNQIVYRKAWGAAKKY DGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGG FPADPQYPNKAVAGALYYQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHT VFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGY GDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPHSPV ADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK >Mature_434_residues MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPGVNLLIIKDNQIVYRKAWGAAKKY DGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGG FPADPQYPNKAVAGALYYQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHT VFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGY GDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPHSPV ADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0214 family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=434, Percent_Identity=99.3087557603687, Blast_Score=895, Evalue=0.0, Organism=Escherichia coli, GI1786574, Length=244, Percent_Identity=26.6393442622951, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR022849 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 47769; Mature: 47769
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPGVNL CCHHHHHHHHHHHHHCCCHHCCCEECCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCEEE LIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEG EEEECCEEEEEECCCCCCCCCCCEEECCCCCHHCCCCEECCCCCEEEHHHHHHHHHHHCC KLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYYQD CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCHHHEEEEEECC KGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHT CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH VFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGL HHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCEECEECCCHHHHHCCCCCCCCCC FSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTF CCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEEEECCCEEECCCC GTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPHSPVADPQKNPNMFESGQLPIATY CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHH GWVVDQVYAALKQK HHHHHHHHHHHHCC >Mature Secondary Structure MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPGVNL CCHHHHHHHHHHHHHCCCHHCCCEECCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCEEE LIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEG EEEECCEEEEEECCCCCCCCCCCEEECCCCCHHCCCCEECCCCCEEEHHHHHHHHHHHCC KLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYYQD CCCCHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCHHHEEEEEECC KGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHT CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH VFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGL HHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCEECEECCCHHHHHCCCCCCCCCC FSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTF CCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEEEECCCEEECCCC GTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPHSPVADPQKNPNMFESGQLPIATY CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHH GWVVDQVYAALKQK HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]