Definition Escherichia coli HS, complete genome.
Accession NC_009800
Length 4,643,538

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The map label for this gene is 157161461

Identifier: 157161461

GI number: 157161461

Start: 2077958

End: 2080084

Strand: Reverse

Name: 157161461

Synonym: EcHS_A2094

Alternate gene names: NA

Gene position: 2080084-2077958 (Counterclockwise)

Preceding gene: 157161462

Following gene: 157161460

Centisome position: 44.8

GC content: 55.38

Gene sequence:

>2127_bases
ATGTCCACAAACATATCTCAGTCCTCGGAGAACCAGAGTTTAACCCAGCGGAAGATTGAGCGTCTTCAACTGAGTGTCCG
GAAAGGGTGGACACCGCCGCCGCGGATCAGCGTCCCGCAATGGGCCGATGACTACCGGAAGCTGGCGAAAGAAGCTGGCA
GTACCTCCGGGAACTGGGAAACATCAACGGTTGAAATTGCCCGCGGTCCTATGCTGGCCGCGACGGAATCGGGCGTCCAC
ATTATCACCGTGATGTGCTGTACCCAGTTAATGAAAACCGCGCTGCTGGAAAACCTGTTTGGTTATTTTGCGCACCTCGA
CCCATGTCCGATTTTGCTCCTGCAGCCGAAGGAAGAGGCCGCTGAGCAGTTTTCCAAAGAACGCATCAGCCCGCTGGTTA
GGGTAACGCCAGTTCTGCGTAACATCATAGGTGACTCAAAGCAGAAGAGTTCAAAAGAAACCATTCTGTATAAAGCTTTC
ACCGGCGGATTTCTGGCGCTGGCCGGCGCCGGTAGTCCAGATAACCTTGCGCGCCGTCCGATCCGTGTTCTGCTGGCAGA
TGAGGTGGATAAATATCCGATTACCCGTGAGGGCGATCCCATCGCTCTGGCGGAAGAGCGAACCGCCACATTTGGCCTTA
ACTGGCTGTCCGTGCGGGCTTGTTCGCCGACGATCGAAGATGAAAGCCGGATTGCTGACAGTTACGAAGATTCAGATCAG
CGGCGGGCCTCTGTAGTTTGCCCCCATTGCGGGCACCGACAGTTCCTTGATTTCTTCAAACATGTTCAATGGCCAAAAGA
AGGTGATAAGCACCTGACCAAAGCGGCCATGATCCATTGTGAATGTTGTGGTGCTGGCTGGTCAGAGGGTGAGCGTCTGC
GGGCATTACAGACAATCCGCTGGCATCAGACCAAACCGTTTGAATGTTGTGGTTCCCGCCATTCACCATTAATGGAATAC
GACCAGAAATGGCATGAAGGAGACGAGGGCAGTGTTGATGCCGTCTGGCGCTGGTCAGAGTCGGAACGGCATGCCGTATA
CCGGGCGATTTGCCCGGACTGCGGGGCCGAGGCGCTGGATAATCACCACGCCGGGTACCAGGCGTCAAAACTCTTCAGTC
CCTGGCAAAAAGACAAGCCATCGGACATTGCAAAGAAATACCTCGATGCGAAAGGGGATCCGGATAAGGAACAGGCCTGG
TGGAACACCCAGATGGGGTTGCCGCACCGGCCTAACCACGGGAAACAGCTCCCGGTTGATGTCCTGCTGGCGCGCCGTGA
AGTCTTCCCGGCCGTCGTTCCTGATGGCGTGGCATTGTTAACTGCGGGCGTCGATACTCAGGATGACCGATTCGAAATCA
CGATCACTGGCTGGGGGCGGGACGAGGAATCGTGGTCAGTTGCGCATGACGTCATTTATGGCGATCTGGAGACTGAGGAA
CCCTGGAAGCGCCTCGATGCGTACCTGAAACAGATATGGCGACGCGGCGACGGGCGAGGGCTGAATATTCTGGCTGCATG
TATGGACTCCGGCGGTCACCACACGCAAAAGGTTTATGAGTTCTGCAAAGATCGCCTTGGGCGCCGCGTCTGGGCTATCA
AGGGCGAATCTGCGCAGGGTGGGAAACGCAACCCCGTCTGGCCAACCAAGCGACCGACATCAAAAAGTAAAGCCAGCTTC
AGGCCAATTATACTTGGCGTGAACTCTGCGAAAGATGTTGTCCGTGGTCGTCTGCATCTTGAACCGCCAGCTTTAGGTAC
TGCCGGTGCGGGCTATATGCACTTCCCGGATGATCGTGACCTCGGCTATTTCAACCAGCTGCTGGCCGAGCGACTGGTTT
ATAAAGTGGTGGCCGGTCAGCGATTCAGTGTCTGGGAGCCTATCCCCGGACGGGCGAACGAAGCACTCGACTGCCTCGTT
TACAGCTATGCCGCGTTGTGTGGGCTGAAACATATGGGATTAAAACTCAATGTTCGGGCCGCTAACCTTCAGGCCGATCC
CGATAAGTTCCTGCCGGCGCCAGCCGAGCCAGAAGAAAAAATCAATTACGAATTACCGGGTGCCATCGTGGATGAGGCTA
TGGCTCCTGTTAAGCGTAAGAACATTTCTAAACTCCTGCCGCAATAA

Upstream 100 bases:

>100_bases
CAGCGTGATGCCTGGCTGAACTGGCCTTCACGCGTGGCACCGCTGATAGCCGCCGATCTGAATGTGCCGGCGGACAGGAT
GACAGAGGTGCTGATTGAAC

Downstream 100 bases:

>100_bases
GGAAAACCATGTTTAACCGAAACACGAGCTTACTTGCTGGTGGGATGACTGATGAGCAGCTCAGAGACGCTCTGCAGAAA
GCGCAGCAGGCTTATATCGA

Product: Phage terminase large subunit (GpA)

Products: NA

Alternate protein names: Phage Terminase GpA; Terminase GpA; Terminase Large Subunit; Bacteriophage Tail Assembly Protein; DNA Packaging Protein Of Prophage; Prophage LambdaW1 Terminase Large Subunit; DNA Packaging Protein Of Putative Prophage; Bacteriophage Tail Assembly Protein-Like Protein; Phage-Related Terminase Large Subunit; Prophage; DNA Packaging R; Bacteriophage Terminase Large Subunit; Large Subunit Of DNA Packaging Dimer; Phage Terminase GpA Family Protein; Terminase Gpa; Terminase Large Subunit Of Phage Lambda; DNA Packaging Protein

Number of amino acids: Translated: 708; Mature: 707

Protein sequence:

>708_residues
MSTNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWETSTVEIARGPMLAATESGVH
IITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEAAEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAF
TGGFLALAGAGSPDNLARRPIRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQ
RRASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIRWHQTKPFECCGSRHSPLMEY
DQKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALDNHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAW
WNTQMGLPHRPNHGKQLPVDVLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEE
PWKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQGGKRNPVWPTKRPTSKSKASF
RPIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRDLGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLV
YSYAALCGLKHMGLKLNVRAANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ

Sequences:

>Translated_708_residues
MSTNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWETSTVEIARGPMLAATESGVH
IITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEAAEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAF
TGGFLALAGAGSPDNLARRPIRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQ
RRASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIRWHQTKPFECCGSRHSPLMEY
DQKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALDNHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAW
WNTQMGLPHRPNHGKQLPVDVLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEE
PWKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQGGKRNPVWPTKRPTSKSKASF
RPIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRDLGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLV
YSYAALCGLKHMGLKLNVRAANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ
>Mature_707_residues
STNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWETSTVEIARGPMLAATESGVHI
ITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEAAEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAFT
GGFLALAGAGSPDNLARRPIRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQR
RASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIRWHQTKPFECCGSRHSPLMEYD
QKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALDNHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAWW
NTQMGLPHRPNHGKQLPVDVLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEEP
WKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQGGKRNPVWPTKRPTSKSKASFR
PIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRDLGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLVY
SYAALCGLKHMGLKLNVRAANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ

Specific function: Unknown

COG id: COG5525

COG function: function code R; Bacteriophage tail assembly protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79385; Mature: 79254

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
TSTVEIARGPMLAATESGVHIITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEA
CCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH
AEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAFTGGFLALAGAGSPDNLARRP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHH
IRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQ
HHHHHHHCCCCCCCCCCCCCEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHCCCCCCH
RRASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIR
HHHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH
WHQTKPFECCGSRHSPLMEYDQKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALD
HCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHH
NHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAWWNTQMGLPHRPNHGKQLPVD
CCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHH
VLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEE
HHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHEECCCCCCC
PWKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC
GKRNPVWPTKRPTSKSKASFRPIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRD
CCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC
LGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLVYSYAALCGLKHMGLKLNVRA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEE
ANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ
ECCCCCHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWE
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
TSTVEIARGPMLAATESGVHIITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEA
CCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH
AEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAFTGGFLALAGAGSPDNLARRP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHH
IRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQ
HHHHHHHCCCCCCCCCCCCCEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHCCCCCCH
RRASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIR
HHHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH
WHQTKPFECCGSRHSPLMEYDQKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALD
HCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHH
NHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAWWNTQMGLPHRPNHGKQLPVD
CCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHH
VLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEE
HHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHEECCCCCCC
PWKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC
GKRNPVWPTKRPTSKSKASFRPIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRD
CCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC
LGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLVYSYAALCGLKHMGLKLNVRA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEE
ANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ
ECCCCCHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA