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The map label for this gene is yedD [H]

Identifier: 157161399

GI number: 157161399

Start: 2026681

End: 2027097

Strand: Reverse

Name: yedD [H]

Synonym: EcHS_A2028

Alternate gene names: 157161399

Gene position: 2027097-2026681 (Counterclockwise)

Preceding gene: 157161403

Following gene: 157161394

Centisome position: 43.65

GC content: 56.12

Gene sequence:

>417_bases
ATGATGAAAAAACTCGCAATTGCAGGTGCGCTCATGTTGCTGGCGGGCTGTGCCGAAGTCGAAAACTATAACAATGTCGT
GAAAACCCCCGCGCCGGACTGGCTGGCGGGCTACTGGCAGACCAAAGGGCCGCAACGTGCGTTGGTCAGTCCGGAAGCGA
TAGGCAGCCTCATTGTCACTAAAGAGGGCGATACCTTGGATTGCCGTCAGTGGCAGCGGGTGATTGCCGTGCCGGGTAAG
TTGACATTGATGTCTGATGATCTCACTAACGTTACCGTAAAACGTGAGCTGTACGAGGTTGAGCGTGACGGTAACACCAT
TGAGTACGATGGTATGACGATGGAGCGTGTGGATCGCCCGACGGCAGAGTGTGCCGCCGCGCTGGATAAAGCGCCGTTAC
CGACGCCACTGCCGTAA

Upstream 100 bases:

>100_bases
ACAAAAATAATGGTTAGATCAAATTTCTCTCTGAACCTGGAAAGGCTGGCGACATCAGGGCTTTAATGCCACAATCCTCT
TTTCTTCTCATGCAGGACGA

Downstream 100 bases:

>100_bases
TGAAATCTCCCCGGCTTGCCGCCGGGGATGGATTTAAATCACCTCTTCGATAACCCACACGCTGACGCTGCCGCCGTTGC
AAAAGAAGGTCGCTTCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MMKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGK
LTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP

Sequences:

>Translated_138_residues
MMKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGK
LTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP
>Mature_138_residues
MMKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGK
LTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788237, Length=137, Percent_Identity=99.2700729927007, Blast_Score=278, Evalue=8e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15133; Mature: 15133

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVT
CCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCCHHHHCEEEEE
KEGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRP
CCCCEECHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCEEHHHHCCC
TAECAAALDKAPLPTPLP
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVT
CCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCCCCCCCCHHHHCEEEEE
KEGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRP
CCCCEECHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCEEHHHHCCC
TAECAAALDKAPLPTPLP
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]