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The map label for this gene is yobA [H]

Identifier: 157161308

GI number: 157161308

Start: 1943572

End: 1943946

Strand: Reverse

Name: yobA [H]

Synonym: EcHS_A1932

Alternate gene names: 157161308

Gene position: 1943946-1943572 (Counterclockwise)

Preceding gene: 157161312

Following gene: 157161307

Centisome position: 41.86

GC content: 50.13

Gene sequence:

>375_bases
ATGGTTTCAACTGCACGCTCCCTTCGCTACGCGCTGGCAATCCTGACCACTTCGTTGGTGACACCTTCCGTCTGGGCACA
TGCGCATTTAACGCATCAGTATCCTGCGGCAAACGCGCAAGTGACAGCTGCCCCGCAGGCAATCACTTTAAACTTCTCGG
AAGGTGTTGAAACAGGATTCAGCGGTGCAAAAATCACGGGGCCAAAAAACGAAAATATTAAAACATTACCGGCGAAGCGA
AATGAGCAGGACCAAAAGCAACTGATTGTTCCACTGGCCGATTCGCTGAAACCCGGAACCTACACCGTTGACTGGCATGT
TGTTTCGGTGGACGGGCATAAAACGAAAGGACACTACACCTTTAGCGTGAAATAA

Upstream 100 bases:

>100_bases
GAGTGAGCCTGGATGGCAAGCCGGAATTGATGATCCTCGACTCAGACATTAGACAAGGTTATGCTCTGTAAAAAAGTTAT
TACAAAAAGGAATAGATAAT

Downstream 100 bases:

>100_bases
ATCATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTCACCTCGCTGATGCTGGTTTTTGGCTTCGCAATGTA
CGGTGCCTGGCTGGCCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MVSTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKR
NEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK

Sequences:

>Translated_124_residues
MVSTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKR
NEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
>Mature_124_residues
MVSTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKR
NEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=124, Percent_Identity=99.1935483870968, Blast_Score=254, Evalue=2e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 13438; Mature: 13438

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGF
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEECCEEEEEECCCCCCCCC
SGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYT
CCEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEE
FSVK
EEEC
>Mature Secondary Structure
MVSTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGF
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEECCEEEEEECCCCCCCCC
SGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYT
CCEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEE
FSVK
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]