Click here to switch to the map view.

The map label for this gene is ydiY [H]

Identifier: 157161182

GI number: 157161182

Start: 1822126

End: 1822884

Strand: Reverse

Name: ydiY [H]

Synonym: EcHS_A1803

Alternate gene names: 157161182

Gene position: 1822884-1822126 (Counterclockwise)

Preceding gene: 157161186

Following gene: 157161181

Centisome position: 39.26

GC content: 49.01

Gene sequence:

>759_bases
ATGAAGCTTTTGAAGACAGTTCCTGCCATCGTTATGTTGGCGGGGGGCATGTTTGCGTCACTGAATGCAGCTGCCGATGA
TTCCGTTTTTACTGTCATGGACGATCCTGCCAGCGCTAAAAAACCTTTCGAAGGTAATCTGAACGCAGGATATCTTGCAC
AATCAGGCAATACGAAAAGCTCCTCACTTACGGCTGACACCACCATGACCTGGTATGGACAAACCACTGCCTGGTCGCTG
TGGGGGAACGCCAGTAATACTTCTTCTAATGATGAGCGTTCTTCAGAAAAATATGCGGCGGGCGGGCGTAGCCGTTTTAA
TTTAACTGATTATGACTATTTATTTGGTCAGGCAAGCTGGCTGACAGACCGTTATAACGGCTATCGAGAGCGCGATGTGT
TGACCGCGGGTTATGGTCGTCAGTTTTTGAATGGCCCGGTACACAGTTTCCGCTTTGAATTCGGTCCAGGTGTGCGTTAC
GACAAATATACCGACAATGCCAGTGAAACCCAGCCGCTGGGCTATGCCTCCGGGGCTTATGCATGGCAGTTGACTGACAA
CGCTAAATTTACGCAGGGTGTTTCGGTCTTTGGCGCGGAAGACACAACGCTGAACTCCGAAAGCGCATTAAATGTTGCTA
TTAATGAACATTTTGGACTGAAGGTGGCTTACAACGTCACATGGAACTCTGAACCTCCAGAGTCTGCACCGGAACATACC
GATCGTCGGACAACTTTATCGCTGGGTTACAGCATGTAA

Upstream 100 bases:

>100_bases
TTTATAATTCGTTACCTTTCCAGGGACGCTAATCTTTGATCCTTAAGAAAGTTTCCGGGACCGCGATGGTCTCTTTTTTT
GTTGTACGGACTCTTGATAA

Downstream 100 bases:

>100_bases
AATTATCTGCCGGACCGTGTTATGCGGTCTGGCTGTCTTCGTTTGTCACTGCTCAGCCCCAAATCATTGCTGCCCAACGG
AGCAACAACATAGCGCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSL
WGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
DRRTTLSLGYSM

Sequences:

>Translated_252_residues
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSL
WGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
DRRTTLSLGYSM
>Mature_252_residues
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSL
WGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
DRRTTLSLGYSM

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=252, Percent_Identity=99.6031746031746, Blast_Score=515, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27598; Mature: 27598

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS
CCHHHHHHHHHHHHCCHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCC
SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW
CEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCHHH
LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY
HHHHHCCCCCCCEEECCCCHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
EEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCC
DRRTTLSLGYSM
CCCEEEEECCCC
>Mature Secondary Structure
MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS
CCHHHHHHHHHHHHCCHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCC
SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW
CEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCHHH
LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY
HHHHHCCCCCCCEEECCCCHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
EEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCC
DRRTTLSLGYSM
CCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]