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The map label for this gene is ynhG

Identifier: 157161143

GI number: 157161143

Start: 1779745

End: 1780749

Strand: Reverse

Name: ynhG

Synonym: EcHS_A1759

Alternate gene names: 157161143

Gene position: 1780749-1779745 (Counterclockwise)

Preceding gene: 157161144

Following gene: 157161140

Centisome position: 38.35

GC content: 51.84

Gene sequence:

>1005_bases
ATGAAACGCGCGTCTTTGCTTACACTCACGCTTATCGGCGCTTTTAGCGCCATCCAGGCTGCCTGGGCGGTTGATTATCC
GCTACCACCAACCGGAAGCCGACTGGTTGGGCAAAATCAAACGTATACGGTGCAAGAAGGGGATAAAAACCTTCAGGCTA
TTGCCCGACGTTTTGATACTGCGGCAATGTTGATCCTTGAAGCCAATAACACTATCGCCCCGGTGCCAAAACCTGGTACG
ACGATAACTATTCCTTCACAACTGTTATTACCTGATGCACCGCGTCAGGGGATTATCGTTAACCTTGCAGAGCTGCGCCT
TTATTATTATCCGCCGGGAGAAAATATTGTGCAGGTTTATCCAATAGGTATTGGATTGCAGGGGCTGGAAACGCCGGTGA
TGGAAACGCGTGTTGGGCAGAAAATCCCTAACCCAACCTGGACGCCTACGGCAGGCATTCGTCAGCGTTCGCTGGAGCGT
GGCATTAAATTACCGCCAGTCGTTCCTGCCGGACCAAATAACCCGCTAGGACGTTACGCACTGCGCCTCGCGCATGGTAA
TGGCGAATACCTCATTCATGGTACCAGTGCGCCGGACAGCGTCGGTTTGCGCGTCAGTTCAGGGTGTATTCGCATGAATG
CACCGGATATTAAAGCCTTGTTCTCCAGCGTGCGGACGGGAACGCCGGTGAAAGTGATCAACGAACCGGTGAAATATTCC
GTGGAGCCTAACGGGATGCGTTATGTTGAAGTACATCGACCACTATCGGCAGAAGAACAGCAGAACGTTCAGACAATGCC
ATACACACTGCCAGCAGGCTTTACGCAATTTAAAGACAATAAGGCTGTAGATCAGAAGTTAGTCGATAAAGCGTTGTATC
GTCGGGCAGGGTATCCGGTTTCGGTGAGCAGTGGAGCAACTCCCGCAGCCAGCAATGCGCCTTCAGTAGAGTCAGCGCAG
AATGGTGAACCAGAGCAAGGGAATATGTTACGCGTGACGCAGTAG

Upstream 100 bases:

>100_bases
ATGTTTACACTGACCTGCACAGGAGTGTTTTGGTTTCAGGTGAACATAAGCGCCATCCGACGTTTCAGCGTGAGTCTCCG
GCAAATACAGGAGGTTTACA

Downstream 100 bases:

>100_bases
CGGTAAACGGCAGACAAAAAAAATGGCGCACAATGTGCGCCATTTTTCACTTCACAGGTACTATTACTTGCGGTATTTAG
TAGCCATGTTGTCCAGACGC

Product: LysM/ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
TITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQ
NGEPEQGNMLRVTQ

Sequences:

>Translated_334_residues
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
TITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQ
NGEPEQGNMLRVTQ
>Mature_334_residues
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT
TITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQ
NGEPEQGNMLRVTQ

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat

Homologues:

Organism=Escherichia coli, GI1787968, Length=334, Percent_Identity=100, Blast_Score=675, Evalue=0.0,
Organism=Escherichia coli, GI1787356, Length=280, Percent_Identity=52.5, Blast_Score=291, Evalue=3e-80,
Organism=Escherichia coli, GI1788299, Length=311, Percent_Identity=45.3376205787781, Blast_Score=246, Evalue=1e-66,
Organism=Escherichia coli, GI1787040, Length=305, Percent_Identity=45.5737704918033, Blast_Score=240, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNHG_ECOLI (P76193)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   F64925
- RefSeq:   AP_002298.1
- RefSeq:   NP_416193.1
- ProteinModelPortal:   P76193
- SMR:   P76193
- DIP:   DIP-12774N
- MINT:   MINT-1318911
- STRING:   P76193
- EnsemblBacteria:   EBESCT00000000505
- EnsemblBacteria:   EBESCT00000017116
- GeneID:   946174
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1668
- KEGG:   eco:b1678
- EchoBASE:   EB3771
- EcoGene:   EG14015
- eggNOG:   COG1376
- GeneTree:   EBGT00050000008974
- HOGENOM:   HBG295778
- OMA:   YFPPGEN
- ProtClustDB:   CLSK880161
- BioCyc:   EcoCyc:G6904-MONOMER
- BioCyc:   MetaCyc:G6904-MONOMER
- Genevestigator:   P76193
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490
- SMART:   SM00257

Pfam domain/function: PF01476 LysM; PF03734 YkuD

EC number: NA

Molecular weight: Translated: 36083; Mature: 36083

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: ACT_SITE 209-209

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDT
CCCHHEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
AAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVY
EEEEEEECCCEECCCCCCCCEEEECCCEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEE
PIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA
EECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
EEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCHHHHHHHHHCCCCCHHEECCCEEEE
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPV
ECCCCEEEEEECCCCCCHHHCCCEECCEECCCCCHHCCCCHHHHHHHHHHHHHHHCCCCE
SVSSGATPAASNAPSVESAQNGEPEQGNMLRVTQ
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDT
CCCHHEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
AAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVY
EEEEEEECCCEECCCCCCCCEEEECCCEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEE
PIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA
EECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS
EEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCHHHHHHHHHCCCCCHHEECCCEEEE
VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPV
ECCCCEEEEEECCCCCCHHHCCCEECCEECCCCCHHCCCCHHHHHHHHHHHHHHHCCCCE
SVSSGATPAASNAPSVESAQNGEPEQGNMLRVTQ
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039