| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is ydhV [H]
Identifier: 157161138
GI number: 157161138
Start: 1773752
End: 1775854
Strand: Reverse
Name: ydhV [H]
Synonym: EcHS_A1754
Alternate gene names: 157161138
Gene position: 1775854-1773752 (Counterclockwise)
Preceding gene: 157161139
Following gene: 157161137
Centisome position: 38.24
GC content: 48.03
Gene sequence:
>2103_bases ATGGCTAACGGTTGGACAGGTAATATATTAAGAGTCAATCTCACGACAGGAAATATTACCCTCGAAGATTCCAGTAAGTT TAAAAGTTTTGTCGGTGGCATGGGCTTCGGCTACAAAATTATGTATGACGAAGTACCGCCAGGCACGAAACCTTTCGATG AAGCGAATAAATTAGTCTTTGCTACCGGCCCATTAACTGGATCTGGTGCCCCCTGTAGTTCTCGCGTAAATATCACCTCA CTTTCTACTTTTACCAAAGGAAATTTAGTCGTCGATGCCCATATGGGTGGCTTTTTTGCAGCGCAAATGAAATTCGCTGG ATACGACGTCATTATTATCGAAGGGAAGGCGAAATCACCGGTATGGCTGAAGATTAAAGATGACAAAGTTAGCCTGGAAA AAGCCGATTTCTTATGGGGAAAAGGGACGCGCGCAACGACGGAAGAAATTTGTCGATTGACCAGTCCGGAAACCTGTGTG GCGGCTATTGGTCAGGCTGGGGAAAACCTTGTTCCTCTCTCTGGCATGTTGAATAGCCGTAACCACAGCGGCGGTGCGGG AACTGGCGCAATAATGGGTTCGAAAAACCTGAAAGCGATTGCGGTTGAAGGGACGAAAGGGGTCAACATTGCCGATCGTC AGGAGATGAAGCGTCTCAATGATTACATGATGACTGAACTTATTGGTGCGAATAACAACCATGTCGTGCCAAGTACGCCA CAATCGTGGGCAGAGTATTCAGATCCCAAGTCACGCTGGACAGCACGTAAAGGGCTGTTTTGGGGCGCGGCTGAAGGTGG TCCGATTGAAACGGGTGAAATTCCGCCAGGCAATCAGAATACGGTCGGCTTTCGTACCTATAAATCCGTTTTTGACTTAG GACCGGCGGCAGAGAAATACACAGTAAAAATGAGCGGCTGCCACTCTTGCCCGATCCGTTGTATGACCCAAATGAATATT CCTCGGGTGAAAGAGTTTGGCGTGCCCAGCACAGGTGGTAACACTTGTGTAGCAAACTTTGTCCATACCACCATCTTCCC GAACGGGCCGAAAGATTTTGAAGATAAAGACGATGGCCGTGTGATTGGTAACTTGGTTGGTCTGAATTTGTTCGATGACT ACGGCCTATGGTGTAACTACGGGCAGTTGCATCGCGACTTTACTTATTGTTACAGCAAAGGGGTGTTCAAGCGTGTTCTG CCTGCTGAAGAGTATGCGGAAATTCACTGGGATCAACTGGAAGCGGGTGACGTTAATTTCATTAAAGATTTTTACTACCG TCTGGCGCATCGTGTGGGTGAGCTGAGTCACCTGGCTGATGGTTCATATGCCATCGCAGAACGCTGGAATTTGGGTGAAG AGTACTGGGGCTACGCGAAAAATAAACTCTGGTCGCCGTTTGGCTATCCGGTTCACCATGCCAATGAAGCGTCAGCGCAG GTCGGTTCCATTGTTAACTGTATGTTCAACCGTGACTGCATGACACATACCCATATCAACTTTATTGGTTCCGGCTTGCC ATTGAAACTGCAACGTGAAGTGGCGAAAGAGCTTTTTGGTTCTGAAGATGCCTACGATGAAACCAAAAACTACACGCCAA TCAATGACGCAAAAATTAAATATGCTAAGTGGTCGCTGTTGCGGGTCTGTTTGCATAACGCCGTCACCCTGTGTAACTGG GTCTGGCCAATGACCGTTTCGCCGCTGAAAAGCCGTAATTACCGGGGCGATCTGGCGCTTGAAGCCAAATTCTTCAAAGC GATCACCGGCGAAGAGATGACTCAGGAAAAATTAGATTTAGCTGCAGAGCGTATCTTTACGTTGCATCGTGCCTACACGG TAAAACTGATGCAAACCAAAGATATGCGTAATGAACACGATCTTATCTGTTCCTGGGTATTCGACAAGGATCCGCAGATC CCGGTCTTTACTGAAGGTACGGACAAAATGGATCGTGACGATATGCATGCTTCGCTCACGATGTTCTACAAAGAAATGGG CTGGGACCCACAGCTTGGTTGTCCGACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAG CACACAATCTACTGCCTGTGTAA
Upstream 100 bases:
>100_bases GTGTGTTATGCGGTGAATGCGCAAACGCCTGCCCAACAGGGGCGTTAAAAATTATCGAGTGGAAAGATATTACTGTGTGA ATCTTGCAAAGGAAAAAATC
Downstream 100 bases:
>100_bases GGAATGGGTGAGATGAACCATCGGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAATGGTT ACAGGGGATGCGTCACCCCG
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITS LSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCV AAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTP QSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNI PRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVL PAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQ VGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNW VWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQI PVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV
Sequences:
>Translated_700_residues MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITS LSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCV AAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTP QSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNI PRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVL PAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQ VGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNW VWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQI PVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV >Mature_699_residues ANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSL STFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVA AIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQ SWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIP RVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLP AEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQV GSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWV WPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIP VFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV
Specific function: Unknown
COG id: COG2414
COG function: function code C; Aldehyde:ferredoxin oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AOR/FOR family [H]
Homologues:
Organism=Escherichia coli, GI1787962, Length=700, Percent_Identity=99.7142857142857, Blast_Score=1462, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013985 - InterPro: IPR013983 - InterPro: IPR001203 [H]
Pfam domain/function: PF01314 AFOR_C; PF02730 AFOR_N [H]
EC number: NA
Molecular weight: Translated: 77886; Mature: 77755
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVF CCCCCCCCEEEEEEEECEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEE ATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSP EECCCCCCCCCCCCCEEEEEECEECCCCEEEEECCCCEEEEEEEECCEEEEEEECCCCCC VWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSR EEEEEECCCCCEEHHHEEECCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHCCC NHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTP CCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCC QSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKY HHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE TVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGR EEEECCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCEEEEEHHEEECCCCCCCCCCCCCCE VIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNF EEEHEECCCEECCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHH IKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQ HHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHCHHHHCCCCCCCCCCCCCCCHHHH VGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIK HHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEE YAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEHHHHHHHHCCCHHHHHHHHH AAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLT HHHHHHHHHHHEEEEEEEHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHH MFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV HHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure ANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVF CCCCCCCEEEEEEEECEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEE ATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSP EECCCCCCCCCCCCCEEEEEECEECCCCEEEEECCCCEEEEEEEECCEEEEEEECCCCCC VWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSR EEEEEECCCCCEEHHHEEECCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHCCC NHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTP CCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCC QSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKY HHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE TVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGR EEEECCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCEEEEEHHEEECCCCCCCCCCCCCCE VIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNF EEEHEECCCEECCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHH IKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQ HHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHCHHHHCCCCCCCCCCCCCCCHHHH VGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIK HHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEE YAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEHHHHHHHHCCCHHHHHHHHH AAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLT HHHHHHHHHHHEEEEEEEHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHH MFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV HHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9023191; 9278503 [H]