| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is 157161025
Identifier: 157161025
GI number: 157161025
Start: 1662058
End: 1664703
Strand: Reverse
Name: 157161025
Synonym: EcHS_A1639
Alternate gene names: NA
Gene position: 1664703-1662058 (Counterclockwise)
Preceding gene: 157161026
Following gene: 157161024
Centisome position: 35.85
GC content: 56.24
Gene sequence:
>2646_bases ATGCTGACCCATCCGCGCTACGGCATGGGGAAACGTCTTGGTGCGGCAGATGTGGATAAATGGGCGCTGTATGTCATCGG CCAGTACTGCGACCAGTCGGTGCCGGACGGTTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCCTACCTGACCACGC AGCGTAAGGCGTGGGATGTGCTCAGTGATTTCTGCTCGGCGATGCGCTGTATGCCGGTATGGAACGGGCAGACGCTGACG TTCGTGCAGGACCGACCATCAGATAAGGTGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTT CCGCTACAGCTTCAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGACCCGAACAACGGCTGGGAGA CGGCGACAGAGCTTGTTGAAGATACGCAGGCCATTGCCCGTTACGGTCGTAATGTCACGAAGATGGATGCCTTTGGCTGT ACCTGCCGGGGGCAGGCACACCGCGCCGGGCTGTGGCTGATTAAAACGGAACTGCTGGAGACGCAGACCGTGGATTTCAG CGTGGGTGCTGAAGGGCTTCGCCATGTACCGGGCGATGTCATTGAAATCTGCGATGATGACTATGCCGGTATCAGCACCG GCGGGCGCGTGCTGGCGGTAAACAGCCAGACCCGGACGCTGACGCTCGACCGTGAAATCACGCTGCCATCTTCCGGCACC ACGCTGATAAGCCTGGTTGACGGGCAGGGGAGTCCGGTCAGCGTGGAGGTTCAGTCCGTCACCGACGGCGTGAAGGTAAA AGTGAGCCGTGTTCCTGACGGTGTTGCTGAATACAGCGTATGGGGGCTGAAGCTGCCGACGCTGCGCCAGCGACTGTTCC GCTGCGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGTGCAGCATGTGCCGGAAAAAGAGGCCATC GTGGATAACGGGGCGCACTTTGACGGCGACCAGAGCGGCACGGTGAATGGTGTCACGCCGCCAGCGGTGCAGCACCTGAC TGCCGAAGTCACCGCAGACAGCGGGGAGTATCAGGTACTGGCCCGCTGGGACACGCCGAAGGTGGTGAAGGGGGTGAGCT TTATGCTTCGCCTGACCGTGGCAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGGCCCGGACGACAGAAACCACATAC CGCTTCACGCAACTGGCGCTGGGACGGTACACGCTGACAGTCCGGGCGGTAAATGCGTGGGGACAGCAGGGCGATCCGGC GTCGGTATCGTTCCGGATTGCCGCACCGGTAGCACCGTCGCGGATTGAGCTGACGCCGGGCTATTTTCAGATAACTGCCA CGCCGCATCTTGCGGTTTATGATCCGACGGTACAGTTTGAGTTCTGGTTCTCGGAAACGCGGATTACCGATATCAGGCAG GTTGAAACCACAGCCCGCTACCTTGGCGCGGGGCTGTACTGGATAGCCGCCAGTATCAATATCAAACCGGGCCATAATTA TTATTTTTACGTTCGCAGTGTGAACACCGTTGGCAAATCGGCATTCGTGGAGGCTGTTGGTCAGCCGAGTGATGACGCAT CCGGCTATCTGGATTTTTTCAAAGGCGAGATAGGGAAAACCCATCTGGCTCAGGAGCTGTGGACGCAGATTGATAACGGT CAGCTTGCGCCTGACCTGGCTGAAATCAGGACATCCATTACGGATGTCAGCAATGAAATCACACAGACCGTCAATAAGAA ACTGGAAGACCAGAGTGCAGCGATCCAGCAGATACAGAAGGTTCAGGTTGATACAAATAATAACCTGAACAGCATGTGGG CCGTGAAACTGCAGCAGATGCAGGACGGACGCCTTTATATTGCGGGTATCGGTGCCGGTATTGAGAATACGCCAGCAGGA ATGCAGAGTCAGGTGCTGCTGGCGGCAGACAGGATTGCGATGATTAATCCTGCGAATGGCAACACAAAGCCGATGTTTGT TGGTCAGGGTGATCAGATATTCATGAACGACGTGTTCCTGAAACGCCTGACGGCTCCCACCATTACCAGCGGCGGTAATC CTCCTGCATTTTCCCTTACACCGGACGGGCGACTGACGGCGAAAAATGCGGATATCAGTGGCAGTGTGAATGCGAACGCC GGGACGCTCAACAATGTCACGATAAATGAAAACTGTCGGGTTCTGGGAAAACTGTCTGCGAACCAGATTGAAGGCGATCT CGTTAAAACAGTGGGCAAAGCTTTCCCCCGGGACTCCCGTGCACCGGAGCGGTGGCCATCAGGGACCATTACCGTCAGGG TTTATGACGATCAGCCGTTTGACCGGCAGATTGTTATTCCCACGGTGGCGTTTCGTGGCGCTAAACATGAGCGGGAGAAT AACGATATTTATTCGTCATGCCGCCTGATAGTGAAGAAAAACGGTGCTGAAATTTATAACCGTACCGCGCTGGATAATAC GCTGGTTTATACAGGTGTTATTGATATGCCTGCTGGTCGCGGTCACATGACGCTGGAGTTTTCGGTATCAGCGTGGCTGG TAAATGACTGGTATCCCACAGCCAGTATCAGTGATTTGCTGGTTGTGGTGATGAAGAAATCCACAGCAGGTATCAGTATC AGCTGA
Upstream 100 bases:
>100_bases GCGATCCTTCGGACATGCTCGTTGTGCAGATGACCGAAGATAAGGCCCGCGAGCATTCAAAAAAGCGCCTCGACAGAACG TTCAGAAGCAGTGCGGCGGT
Downstream 100 bases:
>100_bases ATTTTATAACCCATATGCGGGCGCCATTTCTGGCGCCTTTTTTATTGCAGAAAAGCGAGAGGTAATTATGCGTAAAGTTT GTGCAGCCATTTTGTCCGCA
Product: fibronectin type III domain-containing protein
Products: NA
Alternate protein names: Phage Hocificity Protein; Fibronectin Type III Domain-Containing Protein; Phage Tail Protein; Phage-Related Protein Tail Component; Hocificity Protein; Bacteriophage Protein; Hocificity Protein J Of Prophage; Prophage LambdaSo Hocificity Protein J; Fibronectin Type III; Hocificity Protein J Prophage; Hocificity Protein J Truncation; Tail Fiber V; Bacteriophage Tail Protein; Gifsy-1 Prophage VhsJ; Phage-Related Protein Tail Component-Like Protein; Host-Specificity Protein; Phage Protein; Phage-Related Protein Tail Component-Like; Type III Fibronectin; Hocificity Protein J InteRNAl Deletion; Phage-Like Protein Tail Component-Like Protein
Number of amino acids: Translated: 881; Mature: 881
Protein sequence:
>881_residues MLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMRCMPVWNGQTLT FVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNAVEVNWIDPNNGWETATELVEDTQAIARYGRNVTKMDAFGC TCRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGT TLISLVDGQGSPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRENDDGTYAITAVQHVPEKEAI VDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVLARWDTPKVVKGVSFMLRLTVAADDGSERLVSTARTTETTY RFTQLALGRYTLTVRAVNAWGQQGDPASVSFRIAAPVAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSETRITDIRQ VETTARYLGAGLYWIAASINIKPGHNYYFYVRSVNTVGKSAFVEAVGQPSDDASGYLDFFKGEIGKTHLAQELWTQIDNG QLAPDLAEIRTSITDVSNEITQTVNKKLEDQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMQDGRLYIAGIGAGIENTPAG MQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGRLTAKNADISGSVNANA GTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPTVAFRGAKHEREN NDIYSSCRLIVKKNGAEIYNRTALDNTLVYTGVIDMPAGRGHMTLEFSVSAWLVNDWYPTASISDLLVVVMKKSTAGISI S
Sequences:
>Translated_881_residues MLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMRCMPVWNGQTLT FVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNAVEVNWIDPNNGWETATELVEDTQAIARYGRNVTKMDAFGC TCRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGT TLISLVDGQGSPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRENDDGTYAITAVQHVPEKEAI VDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVLARWDTPKVVKGVSFMLRLTVAADDGSERLVSTARTTETTY RFTQLALGRYTLTVRAVNAWGQQGDPASVSFRIAAPVAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSETRITDIRQ VETTARYLGAGLYWIAASINIKPGHNYYFYVRSVNTVGKSAFVEAVGQPSDDASGYLDFFKGEIGKTHLAQELWTQIDNG QLAPDLAEIRTSITDVSNEITQTVNKKLEDQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMQDGRLYIAGIGAGIENTPAG MQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGRLTAKNADISGSVNANA GTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPTVAFRGAKHEREN NDIYSSCRLIVKKNGAEIYNRTALDNTLVYTGVIDMPAGRGHMTLEFSVSAWLVNDWYPTASISDLLVVVMKKSTAGISI S >Mature_881_residues MLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMRCMPVWNGQTLT FVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNAVEVNWIDPNNGWETATELVEDTQAIARYGRNVTKMDAFGC TCRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGT TLISLVDGQGSPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRENDDGTYAITAVQHVPEKEAI VDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVLARWDTPKVVKGVSFMLRLTVAADDGSERLVSTARTTETTY RFTQLALGRYTLTVRAVNAWGQQGDPASVSFRIAAPVAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSETRITDIRQ VETTARYLGAGLYWIAASINIKPGHNYYFYVRSVNTVGKSAFVEAVGQPSDDASGYLDFFKGEIGKTHLAQELWTQIDNG QLAPDLAEIRTSITDVSNEITQTVNKKLEDQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMQDGRLYIAGIGAGIENTPAG MQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGRLTAKNADISGSVNANA GTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPTVAFRGAKHEREN NDIYSSCRLIVKKNGAEIYNRTALDNTLVYTGVIDMPAGRGHMTLEFSVSAWLVNDWYPTASISDLLVVVMKKSTAGISI S
Specific function: Unknown
COG id: COG4733
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96555; Mature: 96555
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRKAWDV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCHHHHHH LSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNA HHHHHHHHEEEEEECCCEEEEEECCCCCCEEEECCCCEEECCCCCCCEEEHHHHHCCCCE VEVNWIDPNNGWETATELVEDTQAIARYGRNVTKMDAFGCTCRGQAHRAGLWLIKTELLE EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEEEHHC TQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGT EEEEEEECCCHHHHCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCC TLISLVDGQGSPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRE EEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCHHHHEEEEEECHHHHHHHHHHEEEEE NDDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVL CCCCCEEEEEEECCCCCHHEECCCCCCCCCCCCEECCCCCHHHHHEEEEEEECCCCEEEE ARWDTPKVVKGVSFMLRLTVAADDGSERLVSTARTTETTYRFTQLALGRYTLTVRAVNAW EECCCCHHHHHCEEEEEEEEEECCCCHHHHHHHHCCHHHHEEHHEEECEEEEEEEEEECC GQQGDPASVSFRIAAPVAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSETRITDIRQ CCCCCCCEEEEEEECCCCCCEEEECCCEEEEEECCEEEEECCEEEEEEEECCCCCCHHHH VETTARYLGAGLYWIAASINIKPGHNYYFYVRSVNTVGKSAFVEAVGQPSDDASGYLDFF HHHHHHHHCCCEEEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCHHHHHH KGEIGKTHLAQELWTQIDNGQLAPDLAEIRTSITDVSNEITQTVNKKLEDQSAAIQQIQK HCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VQVDTNNNLNSMWAVKLQQMQDGRLYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANG EEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCEEEEECCCC NTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGRLTAKNADISGSVNANA CCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCC GTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPF CEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC DRQIVIPTVAFRGAKHERENNDIYSSCRLIVKKNGAEIYNRTALDNTLVYTGVIDMPAGR CCEEEEEEEEECCCCCCCCCCCHHHEEEEEEECCCCHHHCCCCCCCEEEEEEEEECCCCC GHMTLEFSVSAWLVNDWYPTASISDLLVVVMKKSTAGISIS CEEEEEEEEEEEEEECCCCCCCHHHEEEEEEECCCCCCEEC >Mature Secondary Structure MLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRKAWDV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCHHHHHH LSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNA HHHHHHHHEEEEEECCCEEEEEECCCCCCEEEECCCCEEECCCCCCCEEEHHHHHCCCCE VEVNWIDPNNGWETATELVEDTQAIARYGRNVTKMDAFGCTCRGQAHRAGLWLIKTELLE EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEEEHHC TQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGT EEEEEEECCCHHHHCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCC TLISLVDGQGSPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRE EEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCHHHHEEEEEECHHHHHHHHHHEEEEE NDDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVL CCCCCEEEEEEECCCCCHHEECCCCCCCCCCCCEECCCCCHHHHHEEEEEEECCCCEEEE ARWDTPKVVKGVSFMLRLTVAADDGSERLVSTARTTETTYRFTQLALGRYTLTVRAVNAW EECCCCHHHHHCEEEEEEEEEECCCCHHHHHHHHCCHHHHEEHHEEECEEEEEEEEEECC GQQGDPASVSFRIAAPVAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSETRITDIRQ CCCCCCCEEEEEEECCCCCCEEEECCCEEEEEECCEEEEECCEEEEEEEECCCCCCHHHH VETTARYLGAGLYWIAASINIKPGHNYYFYVRSVNTVGKSAFVEAVGQPSDDASGYLDFF HHHHHHHHCCCEEEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCHHHHHH KGEIGKTHLAQELWTQIDNGQLAPDLAEIRTSITDVSNEITQTVNKKLEDQSAAIQQIQK HCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VQVDTNNNLNSMWAVKLQQMQDGRLYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANG EEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCEEEEECCCC NTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGRLTAKNADISGSVNANA CCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCC GTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPF CEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC DRQIVIPTVAFRGAKHERENNDIYSSCRLIVKKNGAEIYNRTALDNTLVYTGVIDMPAGR CCEEEEEEEEECCCCCCCCCCCHHHEEEEEEECCCCHHHCCCCCCCEEEEEEEEECCCCC GHMTLEFSVSAWLVNDWYPTASISDLLVVVMKKSTAGISIS CEEEEEEEEEEEEEECCCCCCCHHHEEEEEEECCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA