Click here to switch to the map view.

The map label for this gene is tfaR [C]

Identifier: 157161022

GI number: 157161022

Start: 1657376

End: 1657468

Strand: Reverse

Name: tfaR [C]

Synonym: EcHS_A1636

Alternate gene names: 157161022

Gene position: 1657468-1657376 (Counterclockwise)

Preceding gene: 157161023

Following gene: 157161019

Centisome position: 35.69

GC content: 49.46

Gene sequence:

>93_bases
TTGTTGCTGGAAGCCTGGAAAAAGTATCGGGTGTTGCTGAACCGTGTTGATACGTCAACTGCACAGGATATTGAATGGCC
AGCACTGCCGTAG

Upstream 100 bases:

>100_bases
AACAGGAAGCGAACATTGATATCCTTCAAGCTCTGAAGGAGGCTGTTCCCGGTACGTTCAGACTGTTGTTGAGCTGGAAA
TCGCAACGGAGGAAGAAACC

Downstream 100 bases:

>100_bases
GGTAAAACATATAAATTCTATAATTAGATGTATCTTTCCATTTACGGCAAGGAAGGGGGCTTGGAAGACGTAAAGCATCT
CACACCGAGATTATTTTTTA

Product: tail fiber assembly protein, truncation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 30; Mature: 30

Protein sequence:

>30_residues
MLLEAWKKYRVLLNRVDTSTAQDIEWPALP

Sequences:

>Translated_30_residues
MLLEAWKKYRVLLNRVDTSTAQDIEWPALP
>Mature_30_residues
MLLEAWKKYRVLLNRVDTSTAQDIEWPALP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367120, Length=29, Percent_Identity=100, Blast_Score=63, Evalue=4e-12,
Organism=Escherichia coli, GI1787637, Length=29, Percent_Identity=100, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3558; Mature: 3558

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLEAWKKYRVLLNRVDTSTAQDIEWPALP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLEAWKKYRVLLNRVDTSTAQDIEWPALP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA