Click here to switch to the map view.

The map label for this gene is yaiS [H]

Identifier: 157159878

GI number: 157159878

Start: 447890

End: 448561

Strand: Reverse

Name: yaiS [H]

Synonym: EcHS_A0426

Alternate gene names: 157159878

Gene position: 448561-447890 (Counterclockwise)

Preceding gene: 157159880

Following gene: 157159877

Centisome position: 9.66

GC content: 43.45

Gene sequence:

>672_bases
GTGGATAAGGTTTTAGATTCAGCCCTCCTTTCTTCGGCAAATAAAAGAAAGGGTATCCTTGCTATTGGCGCACATCCTGA
CGATATAGAATTAGGCTGTGGCGCATCGCTTGCTCGTCTTGCGCAAAAAGGAATTTATATCGCAGCCGTGGTGATGACTA
CCGGCAACTCTGGTACAGATGGAATAATCGATCGCCATGAAGAATCGCGCAACGCCCTAAAGATATTAGGGTGCCACCAA
ACTATTCATCTTAATTTTGCTGACACCCGCGCTCATTTACAGCTCAATGATATGATTTCCGCTCTGGAAGACATCATTAA
AAATCAAATTCCTTCTGATGTTGAAATCATGCGGGTATATACCATGCATGATGCCGACCGCCATCAGGATCATCTCGCTG
TTTATCAAGCTTCAATGGTTGCCTGCCGCACTATTCCACAAATTCTCGGCTACGAAACCCCAAGTACCTGGCTTTCATTT
ATGCCTCAGGTTTTTGAATCCGTTAAAGAAGAATATTTCACAGTCAAACTTGCTGCATTAAAAAAACATAAAAGCCAGGA
ACGACGTGATTATATGCGTCATGATCGCCTGCGTGCAGTTGCACAATTTCGCGGGCAACAGGTCAATAGCGAATTGGGTG
AAGGCTTTGTAATTCATAAAATGATTCTTTGA

Upstream 100 bases:

>100_bases
CATTTAACATTTATAAATTAACATCTGGCTGCGCCAGAGATTACGTCTCTGAGTGCATCGTTGTGCTTGTAGTATAATAA
ATAAAATGGAGTGTCATTAA

Downstream 100 bases:

>100_bases
GCAAATTGCATGAAAACCTGGATATTTATCTGTATGTCCATAGCAATGTTGCTATGGTTTTTAAGTACGCTAAGACGTAA
ACCCAGTCAAAAGAAAGGCT

Product: putative GlcNAc-PI de-N-acetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGTDGIIDRHEESRNALKILGCHQ
TIHLNFADTRAHLQLNDMISALEDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSF
MPQVFESVKEEYFTVKLAALKKHKSQERRDYMRHDRLRAVAQFRGQQVNSELGEGFVIHKMIL

Sequences:

>Translated_223_residues
MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGTDGIIDRHEESRNALKILGCHQ
TIHLNFADTRAHLQLNDMISALEDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSF
MPQVFESVKEEYFTVKLAALKKHKSQERRDYMRHDRLRAVAQFRGQQVNSELGEGFVIHKMIL
>Mature_223_residues
MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGTDGIIDRHEESRNALKILGCHQ
TIHLNFADTRAHLQLNDMISALEDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSF
MPQVFESVKEEYFTVKLAALKKHKSQERRDYMRHDRLRAVAQFRGQQVNSELGEGFVIHKMIL

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

Organism=Escherichia coli, GI87081726, Length=185, Percent_Identity=100, Blast_Score=386, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 25054; Mature: 25054

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGTD
CCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCEEEEEEEEECCCCCCC
GIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISALEDIIKNQIPSDVEIMRVY
CCCCCCHHHCCCEEEEECCEEEEEEEECCHHHEEHHHHHHHHHHHHHHCCCCCHHEEEEE
TMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSFMPQVFESVKEEYFTVKLAAL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKHKSQERRDYMRHDRLRAVAQFRGQQVNSELGEGFVIHKMIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECC
>Mature Secondary Structure
MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGTD
CCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCEEEEEEEEECCCCCCC
GIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISALEDIIKNQIPSDVEIMRVY
CCCCCCHHHCCCEEEEECCEEEEEEEECCHHHEEHHHHHHHHHHHHHHCCCCCHHEEEEE
TMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSFMPQVFESVKEEYFTVKLAAL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKHKSQERRDYMRHDRLRAVAQFRGQQVNSELGEGFVIHKMIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8808933; 9278503 [H]