Definition Escherichia coli HS, complete genome.
Accession NC_009800
Length 4,643,538

Click here to switch to the map view.

The map label for this gene is 157159711

Identifier: 157159711

GI number: 157159711

Start: 277076

End: 277432

Strand: Reverse

Name: 157159711

Synonym: EcHS_A0256

Alternate gene names: NA

Gene position: 277432-277076 (Counterclockwise)

Preceding gene: 157159712

Following gene: 157159709

Centisome position: 5.97

GC content: 44.82

Gene sequence:

>357_bases
ATGAATAAAGCATCGAACATTATCACAATTAAAGGTCAACCAGCCGCAGTAACATTTGAAGCCGATATCAACGCATTTCG
CGGCAAGTTCCTCAATGTAAACGGTTATTGTGACTTTGTAGCCACAAGTATTGAGGCATTATATCGTGAAGGCGAAAGCG
CGCTGGATGAGTGGATGGCGGATTGTGAAGAGGACGGTATTGCCCCTTTTCGTGAAGAAGAAGAGCAAAAACGCCTGACG
CTTCGTGTTCCTCATCACATTGATTCGCGGCTGACCATCGTCGCCAGACAACATTCCATTTCAAAAAACCAGCTCATTGT
TGATGTCTTAGAACGTGAGTTTTCAGCCCAGATGTAA

Upstream 100 bases:

>100_bases
ACCAAATTCAGCACACATGAGCCACATCCAAAAAATGTGATGGATAAAGGCGCAGTAGCAGGTCTTAAGGAGTGGTTTGT
TAACTGTGTAGGGGTAGATT

Downstream 100 bases:

>100_bases
ACAGGTCGGATGCCGCGTGGCATCCGACCTTTTGCCAGTTCGTCAATATTACCCATTTACAAAATCGTCTCCTCCGTCAA
AATCCGCCGCGCGCCTAAAA

Product: HicB family protein

Products: NA

Alternate protein names: Addiction Module HicB-Related Protein; HicB-Related Protein; Xin-Antitoxin Systems HicB; HicB-Like Protein

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMADCEEDGIAPFREEEEQKRLT
LRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM

Sequences:

>Translated_118_residues
MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMADCEEDGIAPFREEEEQKRLT
LRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM
>Mature_118_residues
MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMADCEEDGIAPFREEEEQKRLT
LRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM

Specific function: Unknown

COG id: COG4226

COG function: function code S; Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13400; Mature: 13400

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMA
CCCCCCEEEECCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH
DCEEDGIAPFREEEEQKRLTLRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM
HHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMA
CCCCCCEEEECCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH
DCEEDGIAPFREEEEQKRLTLRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM
HHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA