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The map label for this gene is yadS

Identifier: 157159624

GI number: 157159624

Start: 175872

End: 176495

Strand: Reverse

Name: yadS

Synonym: EcHS_A0161

Alternate gene names: 157159624

Gene position: 176495-175872 (Counterclockwise)

Preceding gene: 157159625

Following gene: 157159621

Centisome position: 3.8

GC content: 53.69

Gene sequence:

>624_bases
ATGCTCGTCTATTGGCTGGATATAGTCGGCACAGCGGTATTTGCCATCTCCGGCGTTTTGTTAGCCGGAAAATTGCGTAT
GGACCCTTTTGGTGTTCTGGTACTGGGCGTGGTTACCGCTGTAGGCGGCGGGACAATTCGCGACATGGCGCTGGATCACG
GCCCGGTATTTTGGGTGAAAGATCCCACCGATCTGGTCGTTGCAATGGTCACCAGCATGCTGACCATCGTGCTGGTGCGC
CAGCCAAGACGCTTACCAAAATGGATGTTGCCGGTGCTGGACGCCGTTGGTCTGGCGGTGTTTGTCGGCATTGGCGTGAA
TAAAGCCTTTAATGCGGAAGCCGGTCCGTTAATCGCGGTTTGTATGGGCGTCATTACTGGCGTTGGCGGCGGGATCATTC
GTGATGTACTGGCCCGCGAAATCCCCATGATTTTACGTACAGAAATCTACGCAACTGCCTGTATTATCGGCGGTATTGTC
CACGCTACGGCTTATTACACATTTTCCGTACCACTGGAAACAGCCAGTATGATGGGCATGGTCGTGACGCTATTGATTCG
GCTGGCGGCTATTCGTTGGCATCTTAAGCTACCGACGTTTGCGCTGGATGAGAATGGGCGTTGA

Upstream 100 bases:

>100_bases
GCAAGCCCACGTATTATCCTCGCTGCACAACAGCTCTGTAATGCGCTTTCACAGGTAGATTAGTGCCTGACCTTTTCAGG
TGCTCAGTGGGGATTGAACA

Downstream 100 bases:

>100_bases
AGAGAGAAGATGTGCCGGATAGTTTATCCGGCACATGAACAACAGATTAGATACTAAAGGAAGAACCGCAACCGCAGGTG
CTTTTCGCGTTCGGGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVR
QPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR

Sequences:

>Translated_207_residues
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVR
QPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR
>Mature_207_residues
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVR
QPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family

Homologues:

Organism=Escherichia coli, GI1786352, Length=207, Percent_Identity=100, Blast_Score=406, Evalue=1e-115,
Organism=Escherichia coli, GI87082304, Length=151, Percent_Identity=42.3841059602649, Blast_Score=117, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YADS_ECOL6 (P0AFP1)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_752143.1
- ProteinModelPortal:   P0AFP1
- EnsemblBacteria:   EBESCT00000040657
- GeneID:   1035163
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c0193
- GeneTree:   EBGT00050000009204
- HOGENOM:   HBG610998
- OMA:   EVYASAC
- ProtClustDB:   PRK10578
- InterPro:   IPR005115

Pfam domain/function: PF03458 UPF0126

EC number: NA

Molecular weight: Translated: 22128; Mature: 22128

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x113c1cb4)-; HASH(0x11e16f44)-; HASH(0x11b8fa94)-; HASH(0x11e4b264)-; HASH(0x11e47964)-; HASH(0x11e2e0ec)-; HASH(0x11f455f4)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVK
CEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEE
DPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAV
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAYYTFSVPLETASMMGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHH
VVTLLIRLAAIRWHLKLPTFALDENGR
HHHHHHHHHHHHHHEECCEEECCCCCH
>Mature Secondary Structure
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVK
CEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEE
DPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAV
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAYYTFSVPLETASMMGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHH
VVTLLIRLAAIRWHLKLPTFALDENGR
HHHHHHHHHHHHHHEECCEEECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157