Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156978319

Identifier: 156978319

GI number: 156978319

Start: 2196356

End: 2196499

Strand: Reverse

Name: 156978319

Synonym: VIBHAR_07126

Alternate gene names: NA

Gene position: 2196499-2196356 (Counterclockwise)

Preceding gene: 156978326

Following gene: 156978318

Centisome position: 99.66

GC content: 28.47

Gene sequence:

>144_bases
ATGCCTACAAGCAACCATCTTGAAAAATGCCGAAAGTTTGCATTTTTTATATTTATTAAATTTTTAGGTAGTGCTTTGGA
ATTTGGAATTTGGAATTTGGAATTTGGAATCATACTCAAAGAGTTTCGTATTAAAACAATATGA

Upstream 100 bases:

>100_bases
TCCCTTTCAATAAAATAGATTCACGTCACAGAACCACAAGAAAAAATTAACATATAACTCAAAATTCAAATAGGCAGGGA
ATAAAAAATACAATTTAGGA

Downstream 100 bases:

>100_bases
ATCAAAAAAGCGTAGTGAAAAAGTTTCATGAGTTAGATAATTATAACTCTGAGTTATCCTCTATAGATGTGGGGCTTTAT
TGCTTAACTCAGAGCGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 46

Protein sequence:

>47_residues
MPTSNHLEKCRKFAFFIFIKFLGSALEFGIWNLEFGIILKEFRIKTI

Sequences:

>Translated_47_residues
MPTSNHLEKCRKFAFFIFIKFLGSALEFGIWNLEFGIILKEFRIKTI
>Mature_46_residues
PTSNHLEKCRKFAFFIFIKFLGSALEFGIWNLEFGIILKEFRIKTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5596; Mature: 5465

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSNHLEKCRKFAFFIFIKFLGSALEFGIWNLEFGIILKEFRIKTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTSNHLEKCRKFAFFIFIKFLGSALEFGIWNLEFGIILKEFRIKTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA