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The map label for this gene is lumQ [H]

Identifier: 156978288

GI number: 156978288

Start: 2166884

End: 2167696

Strand: Direct

Name: lumQ [H]

Synonym: VIBHAR_07095

Alternate gene names: 156978288

Gene position: 2166884-2167696 (Clockwise)

Preceding gene: 156978286

Following gene: 156978289

Centisome position: 98.32

GC content: 46.0

Gene sequence:

>813_bases
ATGAGTAACCCAGATAACCCGAAAGCCCTGCTGCATAAAGAGATCATGCTGCCTAAGCCAGCAGAATTGATCACGCTTCC
GTCTTATATGGAATGCCATGATCATGCTTACACCCAGATCGTGATCGGCTTGAAAGGACAAGCGGAATTTGAAGTGCGTG
GACAGGGCAACCTAGTTGGTCCGGGACAAGGTTGTATCGTAACAGCGTCTTCTGATCATGCTTTCGGCGGCGTGATTCAT
CAATCAGATATTTTGGTGCTCAATATGCCAAAGCCAGCCAATGATGACCCCGAGATGCTGCAGAAAATCAACAATCTAGA
GCGTTCTCATCTTTACTTCCAGTTGGATGGTCAAATCCAAAAGCTGATTCAGATGCTGGTGCAAGAGATGCGTAATCACC
CAGATGACCTACTGCTAAGCCGTGCGTGTAACGATACTGTGATCGCTCTGATGCAGCGTCATATCTCAGCATTTGAAACC
TCAAAGAAAGAGTCACGCTTTGATCTGGATGCGATTGACCGTTACATAGAGCAGCACTTGAGCCACAAAATCAGTGTGGC
GCAGCTGGCGGGCAGTGTGTTTTTGGGCGAAAGCCAGTTCCACAGTTTATTTAAAGATCAGATGGGCATTACGCCGCATC
AGTATGTGCTAGGTAAACGTATTGATATGGCGCGTGACTTAATTGAACAAGGTCACCTTACGCTTGGACAAATTGCTGAA
TTTACTGGTTTCTCGAGCCAAAGTACCTTTACTCATACTTTTACTCGTTTACAAGGGTTATCGCCTTCTCAGTATAAGAA
ACAGGTTGGCTAA

Upstream 100 bases:

>100_bases
GGTTTGATCTTGTGCGATTGACTCGGGGAGGAGTTGCAACCCAACCGAGAAGGTATATGATGCCAAGGTGTAAGCTGACC
GTGTAAAGACGACTGTTGAA

Downstream 100 bases:

>100_bases
TTATATTGGTATAGTTGCTTATCTGATGACAGCCGCGCATGAGTCGCGGCTTTTTTGTGCTTGCGTTTTGTACAGGAAAG
TCGAACTTTTTTGCGTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSNPDNPKALLHKEIMLPKPAELITLPSYMECHDHAYTQIVIGLKGQAEFEVRGQGNLVGPGQGCIVTASSDHAFGGVIH
QSDILVLNMPKPANDDPEMLQKINNLERSHLYFQLDGQIQKLIQMLVQEMRNHPDDLLLSRACNDTVIALMQRHISAFET
SKKESRFDLDAIDRYIEQHLSHKISVAQLAGSVFLGESQFHSLFKDQMGITPHQYVLGKRIDMARDLIEQGHLTLGQIAE
FTGFSSQSTFTHTFTRLQGLSPSQYKKQVG

Sequences:

>Translated_270_residues
MSNPDNPKALLHKEIMLPKPAELITLPSYMECHDHAYTQIVIGLKGQAEFEVRGQGNLVGPGQGCIVTASSDHAFGGVIH
QSDILVLNMPKPANDDPEMLQKINNLERSHLYFQLDGQIQKLIQMLVQEMRNHPDDLLLSRACNDTVIALMQRHISAFET
SKKESRFDLDAIDRYIEQHLSHKISVAQLAGSVFLGESQFHSLFKDQMGITPHQYVLGKRIDMARDLIEQGHLTLGQIAE
FTGFSSQSTFTHTFTRLQGLSPSQYKKQVG
>Mature_269_residues
SNPDNPKALLHKEIMLPKPAELITLPSYMECHDHAYTQIVIGLKGQAEFEVRGQGNLVGPGQGCIVTASSDHAFGGVIHQ
SDILVLNMPKPANDDPEMLQKINNLERSHLYFQLDGQIQKLIQMLVQEMRNHPDDLLLSRACNDTVIALMQRHISAFETS
KKESRFDLDAIDRYIEQHLSHKISVAQLAGSVFLGESQFHSLFKDQMGITPHQYVLGKRIDMARDLIEQGHLTLGQIAEF
TGFSSQSTFTHTFTRLQGLSPSQYKKQVG

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 30289; Mature: 30158

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPDNPKALLHKEIMLPKPAELITLPSYMECHDHAYTQIVIGLKGQAEFEVRGQGNLVG
CCCCCCHHHHHHHHHCCCCCHHEEECCCHHHHHHCCEEEEEEEECCCEEEEECCCCCEEC
PGQGCIVTASSDHAFGGVIHQSDILVLNMPKPANDDPEMLQKINNLERSHLYFQLDGQIQ
CCCCEEEEECCCCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHCCHHHEEEEEECHHHH
KLIQMLVQEMRNHPDDLLLSRACNDTVIALMQRHISAFETSKKESRFDLDAIDRYIEQHL
HHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHH
SHKISVAQLAGSVFLGESQFHSLFKDQMGITPHQYVLGKRIDMARDLIEQGHLTLGQIAE
HHHHHHHHHHHHHEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FTGFSSQSTFTHTFTRLQGLSPSQYKKQVG
HCCCCCCCHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
SNPDNPKALLHKEIMLPKPAELITLPSYMECHDHAYTQIVIGLKGQAEFEVRGQGNLVG
CCCCCHHHHHHHHHCCCCCHHEEECCCHHHHHHCCEEEEEEEECCCEEEEECCCCCEEC
PGQGCIVTASSDHAFGGVIHQSDILVLNMPKPANDDPEMLQKINNLERSHLYFQLDGQIQ
CCCCEEEEECCCCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHCCHHHEEEEEECHHHH
KLIQMLVQEMRNHPDDLLLSRACNDTVIALMQRHISAFETSKKESRFDLDAIDRYIEQHL
HHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHH
SHKISVAQLAGSVFLGESQFHSLFKDQMGITPHQYVLGKRIDMARDLIEQGHLTLGQIAE
HHHHHHHHHHHHHEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FTGFSSQSTFTHTFTRLQGLSPSQYKKQVG
HCCCCCCCHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]