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The map label for this gene is yhjK [H]

Identifier: 156978280

GI number: 156978280

Start: 2157209

End: 2159131

Strand: Reverse

Name: yhjK [H]

Synonym: VIBHAR_07087

Alternate gene names: 156978280

Gene position: 2159131-2157209 (Counterclockwise)

Preceding gene: 156978281

Following gene: 156978278

Centisome position: 97.96

GC content: 47.22

Gene sequence:

>1923_bases
GTGAAAAACATGACCCTATATAAGAAGCTTGTAGTGGGAATGGTTACGGTCTTTTTACTTTTGATGGCATCAGTATTCGT
AATCCAGTTCAACACTACTCGAGACAGCTTGGAGCAGCAGCAACGTTCAGAGGTCAACAACACCATTAACACCGTTGGTT
TGGCACTGGCACCGTATCTAAAAGACAAAGATAAGGTCGCCGTTGAATCCGTGATTAATGCGTTGTTCGACGGCAGTACT
TATTCTGTCGTACGTCTCACCGCGTTAGATTCCGATTACCAAATCGTACGTTCATACCCGGTGAAACCGACAAGTGTGCC
GCAATGGTTTATCGATTTAAATCTGTTCAAAGCCATTCACGACAAACGCGTGGTAACCAGCGGTTGGATGCAGCTTGCAG
AGGTAGAAATCATCAGCCACCCAGGTGCAGCATACGACCAGCTGTGGCAAGGCTTTGTTCGCCTGCTGACTGCGTTTGGC
GTTATCTTCCTTGCTGGTCTAGTGGCGATTTCTTACATCCTACGTCGCTCACTCAAACCTTTAGCGGCCATCGTGAAGAA
AATGCACGAGATTGCTAACAACCAATTTGGCGACCCACTGGCTCGTCCAAAAACCAAAGATTTGATTGCAGTCGTCGACG
GCATCAACTCAATGTCGGCACAAATCGAACTGTCATTTAAAGAACAGGCAAAAGAGGCGCAGCGTCTGCGTGCTCAAGCT
TACCTAGATCCAATCTCCAAACTGGGTAACCGCTCGTTCTACATCAACCAAGTTGATCAATGGCTGGCAGAGCAAACGCA
AGGGGGTATCGCGCTACTCCATGCTGAGTACATTGGTGACATTTACGAGACCAAAGATTACCAACGCGCCGATGCCCACG
TGAAAGAGTTATCTCAACGTCTCAAGAACACCATCGATGTACCGGGAGCAACCATTGCTCGTCTGTCTAGCGACGAATTT
GGTCTACTATTCCCGCACATGGATGAGAGCGAGTTACGCATTCTTGCAGACAGCATCGTCAACTGTGTGAATGGCCTTAA
TACCGATCCTACTGGCATGGCGAAACCAAAAGCATCACTGGGTGTCGCGCACAGTAAAGATCAGAAAACACGTACAGAAG
TGTTATCGATGGTGGATAACGCCCTATCGAAAGCCAAAGCGCAGCCAGATAAAGCTTACGGCTTCGTGGGTGGTGAAAAC
ACCTCGAACCTAATGGGTAAACAGCAATGGAAAGCGCTGGTTGAAGAAGCGATTCACAGCGATTGGATTAAATTCCGCTT
CCAGTCTGCGAAGAATACTTGGGGTAAAGTCTTCCATAATGAGGTGTTCTCAAGCATCGAAAAAGATGGTGAAACCTACC
GTGCGAACCAATACTTGTTTGCTCTTGAACAGTTAGAAGCAACCAACATCTTCGACCAATACGTCATCGAGTCGATGATC
AAGATGCTTGAAAGTGGCGAACTAAAAGAACCAGTAGCCATCAACATTGCCCAAAGTAGCTTGTCTCAACCATCGTTCAT
TCGTTGGACCACCAGCATGCTAGAGAAGCACTCAAAAGTGGCTCCAATGCTGCACTTTGAGCTTCCAGAAGCGTGTTTCA
TTGACCATCCGCACCACACTGCTCTGCTGTGTAATGCGATTCGTCAAGCGGGTGCGGAGTTCGGTGTTGATAACTACGGC
CGTAACTTCCAGTCACTTGAGTACATTCAGGAATTCCGCCCGAATTACGTAAAACTGGATTATCTGTTCACCCACAACTT
GCACGACGAGAAACAAAAATTCACGCTGACATCGATTTCTCGTACCGCTCACAACTTGGGTATTACGACGATTGCATCGC
GTGTTGAAACACAGATTCAGTTGGATTTCCTAACCGAGCATTTCGTTGAAGTCTTCCAAGGCTTCATTGTCGACAAGGAA
TAA

Upstream 100 bases:

>100_bases
GAGAGCTAGCAGGAAAAGCCTCACGTTTGAGCCTTTGGAATGACTTACGCTCGCGCGAACGTAAGTTGCAGTTAAAGAAA
CCTAAAATTAACTATGACGA

Downstream 100 bases:

>100_bases
CGAAGGTACACCAAGGATGAAAGACCCTTTACTGAATTCGCTCATTTACGTTAGCCGATACTTCGGGCTAGCCAACTCAC
CGGAAGCGCTGATTAACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MKNMTLYKKLVVGMVTVFLLLMASVFVIQFNTTRDSLEQQQRSEVNNTINTVGLALAPYLKDKDKVAVESVINALFDGST
YSVVRLTALDSDYQIVRSYPVKPTSVPQWFIDLNLFKAIHDKRVVTSGWMQLAEVEIISHPGAAYDQLWQGFVRLLTAFG
VIFLAGLVAISYILRRSLKPLAAIVKKMHEIANNQFGDPLARPKTKDLIAVVDGINSMSAQIELSFKEQAKEAQRLRAQA
YLDPISKLGNRSFYINQVDQWLAEQTQGGIALLHAEYIGDIYETKDYQRADAHVKELSQRLKNTIDVPGATIARLSSDEF
GLLFPHMDESELRILADSIVNCVNGLNTDPTGMAKPKASLGVAHSKDQKTRTEVLSMVDNALSKAKAQPDKAYGFVGGEN
TSNLMGKQQWKALVEEAIHSDWIKFRFQSAKNTWGKVFHNEVFSSIEKDGETYRANQYLFALEQLEATNIFDQYVIESMI
KMLESGELKEPVAINIAQSSLSQPSFIRWTTSMLEKHSKVAPMLHFELPEACFIDHPHHTALLCNAIRQAGAEFGVDNYG
RNFQSLEYIQEFRPNYVKLDYLFTHNLHDEKQKFTLTSISRTAHNLGITTIASRVETQIQLDFLTEHFVEVFQGFIVDKE

Sequences:

>Translated_640_residues
MKNMTLYKKLVVGMVTVFLLLMASVFVIQFNTTRDSLEQQQRSEVNNTINTVGLALAPYLKDKDKVAVESVINALFDGST
YSVVRLTALDSDYQIVRSYPVKPTSVPQWFIDLNLFKAIHDKRVVTSGWMQLAEVEIISHPGAAYDQLWQGFVRLLTAFG
VIFLAGLVAISYILRRSLKPLAAIVKKMHEIANNQFGDPLARPKTKDLIAVVDGINSMSAQIELSFKEQAKEAQRLRAQA
YLDPISKLGNRSFYINQVDQWLAEQTQGGIALLHAEYIGDIYETKDYQRADAHVKELSQRLKNTIDVPGATIARLSSDEF
GLLFPHMDESELRILADSIVNCVNGLNTDPTGMAKPKASLGVAHSKDQKTRTEVLSMVDNALSKAKAQPDKAYGFVGGEN
TSNLMGKQQWKALVEEAIHSDWIKFRFQSAKNTWGKVFHNEVFSSIEKDGETYRANQYLFALEQLEATNIFDQYVIESMI
KMLESGELKEPVAINIAQSSLSQPSFIRWTTSMLEKHSKVAPMLHFELPEACFIDHPHHTALLCNAIRQAGAEFGVDNYG
RNFQSLEYIQEFRPNYVKLDYLFTHNLHDEKQKFTLTSISRTAHNLGITTIASRVETQIQLDFLTEHFVEVFQGFIVDKE
>Mature_640_residues
MKNMTLYKKLVVGMVTVFLLLMASVFVIQFNTTRDSLEQQQRSEVNNTINTVGLALAPYLKDKDKVAVESVINALFDGST
YSVVRLTALDSDYQIVRSYPVKPTSVPQWFIDLNLFKAIHDKRVVTSGWMQLAEVEIISHPGAAYDQLWQGFVRLLTAFG
VIFLAGLVAISYILRRSLKPLAAIVKKMHEIANNQFGDPLARPKTKDLIAVVDGINSMSAQIELSFKEQAKEAQRLRAQA
YLDPISKLGNRSFYINQVDQWLAEQTQGGIALLHAEYIGDIYETKDYQRADAHVKELSQRLKNTIDVPGATIARLSSDEF
GLLFPHMDESELRILADSIVNCVNGLNTDPTGMAKPKASLGVAHSKDQKTRTEVLSMVDNALSKAKAQPDKAYGFVGGEN
TSNLMGKQQWKALVEEAIHSDWIKFRFQSAKNTWGKVFHNEVFSSIEKDGETYRANQYLFALEQLEATNIFDQYVIESMI
KMLESGELKEPVAINIAQSSLSQPSFIRWTTSMLEKHSKVAPMLHFELPEACFIDHPHHTALLCNAIRQAGAEFGVDNYG
RNFQSLEYIQEFRPNYVKLDYLFTHNLHDEKQKFTLTSISRTAHNLGITTIASRVETQIQLDFLTEHFVEVFQGFIVDKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HAMP domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=505, Percent_Identity=21.980198019802, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789650, Length=598, Percent_Identity=19.8996655518395, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788381, Length=450, Percent_Identity=20.6666666666667, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1790496, Length=149, Percent_Identity=28.8590604026846, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00672 HAMP [H]

EC number: NA

Molecular weight: Translated: 72250; Mature: 72250

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50885 HAMP ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMTLYKKLVVGMVTVFLLLMASVFVIQFNTTRDSLEQQQRSEVNNTINTVGLALAPYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDKDKVAVESVINALFDGSTYSVVRLTALDSDYQIVRSYPVKPTSVPQWFIDLNLFKAIH
CCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHH
DKRVVTSGWMQLAEVEIISHPGAAYDQLWQGFVRLLTAFGVIFLAGLVAISYILRRSLKP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LAAIVKKMHEIANNQFGDPLARPKTKDLIAVVDGINSMSAQIELSFKEQAKEAQRLRAQA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHH
YLDPISKLGNRSFYINQVDQWLAEQTQGGIALLHAEYIGDIYETKDYQRADAHVKELSQR
HHHHHHHHCCCCEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHH
LKNTIDVPGATIARLSSDEFGLLFPHMDESELRILADSIVNCVNGLNTDPTGMAKPKASL
HHHCCCCCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHC
GVAHSKDQKTRTEVLSMVDNALSKAKAQPDKAYGFVGGENTSNLMGKQQWKALVEEAIHS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
DWIKFRFQSAKNTWGKVFHNEVFSSIEKDGETYRANQYLFALEQLEATNIFDQYVIESMI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
KMLESGELKEPVAINIAQSSLSQPSFIRWTTSMLEKHSKVAPMLHFELPEACFIDHPHHT
HHHHCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHCCCHHEECCCCHHCCCCCCHH
ALLCNAIRQAGAEFGVDNYGRNFQSLEYIQEFRPNYVKLDYLFTHNLHDEKQKFTLTSIS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHH
RTAHNLGITTIASRVETQIQLDFLTEHFVEVFQGFIVDKE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNMTLYKKLVVGMVTVFLLLMASVFVIQFNTTRDSLEQQQRSEVNNTINTVGLALAPYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDKDKVAVESVINALFDGSTYSVVRLTALDSDYQIVRSYPVKPTSVPQWFIDLNLFKAIH
CCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHH
DKRVVTSGWMQLAEVEIISHPGAAYDQLWQGFVRLLTAFGVIFLAGLVAISYILRRSLKP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LAAIVKKMHEIANNQFGDPLARPKTKDLIAVVDGINSMSAQIELSFKEQAKEAQRLRAQA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHH
YLDPISKLGNRSFYINQVDQWLAEQTQGGIALLHAEYIGDIYETKDYQRADAHVKELSQR
HHHHHHHHCCCCEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHH
LKNTIDVPGATIARLSSDEFGLLFPHMDESELRILADSIVNCVNGLNTDPTGMAKPKASL
HHHCCCCCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHC
GVAHSKDQKTRTEVLSMVDNALSKAKAQPDKAYGFVGGENTSNLMGKQQWKALVEEAIHS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
DWIKFRFQSAKNTWGKVFHNEVFSSIEKDGETYRANQYLFALEQLEATNIFDQYVIESMI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
KMLESGELKEPVAINIAQSSLSQPSFIRWTTSMLEKHSKVAPMLHFELPEACFIDHPHHT
HHHHCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHCCCHHEECCCCHHCCCCCCHH
ALLCNAIRQAGAEFGVDNYGRNFQSLEYIQEFRPNYVKLDYLFTHNLHDEKQKFTLTSIS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHH
RTAHNLGITTIASRVETQIQLDFLTEHFVEVFQGFIVDKE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 10493123 [H]