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The map label for this gene is yggB [C]

Identifier: 156978278

GI number: 156978278

Start: 2154108

End: 2154707

Strand: Reverse

Name: yggB [C]

Synonym: VIBHAR_07084

Alternate gene names: 156978278

Gene position: 2154707-2154108 (Counterclockwise)

Preceding gene: 156978280

Following gene: 156978275

Centisome position: 97.76

GC content: 44.0

Gene sequence:

>600_bases
ATGAATCATTGGATGCATTTAGAGCAAATCAGTCAGTATTTCACGGCTGGCTCTATCGGTTATAAAGTGTTGATGGGCGT
CATCATTCTGATCGCTTATCGCTTGCTAAAGAAAATCGCCAACCGTGCGATCTTAAATTTGGCAGAAGCTAAAGGCGTAA
ACAAAGCGCGCTTGAGCTTTATTCAGCGCTGCTTCAACGTCGCGTTCTTGTTTTTGTTTGCTTCGCTTTTCGCCATCGTA
ACCGGCATTGGTTATGGCGATGTGTCACTCTTCCTATCGTCTATCTTTGCGGTATTGGGTGTGGCTTTCATCGCGCAATG
GTCGATTCTAAGTAACATCACAGCAAGCTTTCTGATCTTTTTTGTCTTCCCGTACCGCGTCGGTGATCGAATTAAAGTCG
TGGACAAAGACGAAGACATCAGCGGTGAGATTCAGGAAATCCGTATGTTCCATGTGTTGATCAAGCACGACAACGGCAAC
CTAATCACTTATCCAAACAACTTGATGCTACAAAAAGCAGTCTTAAAACTGGCAAAAGAAAAAGCCAAGCCTGAGGAGCC
AAAAACCACCTCACGCATTTATACCCGCAGAAATAAATAA

Upstream 100 bases:

>100_bases
TTGTTCAATGCGAATATTACTCTGTATCTAAAATAGTTAATTACTTGCGAGCCAAAATCGGCTATAACACGCGCCTTCTT
AATATTCTCGAGTTGAAGAA

Downstream 100 bases:

>100_bases
CCCACTAAAAAGCCGATGTAGATACATCGGCTTTTTGTTTGTTATGAAAGGTTATCTGTCTTTAGGGTGCCTATTTAATT
TTGATTCGTCTTAAAACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Ion Channel Protein; Mscs Mechanosensitive Ion Channel; MscS Mechanosensitive Ion Channel

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNHWMHLEQISQYFTAGSIGYKVLMGVIILIAYRLLKKIANRAILNLAEAKGVNKARLSFIQRCFNVAFLFLFASLFAIV
TGIGYGDVSLFLSSIFAVLGVAFIAQWSILSNITASFLIFFVFPYRVGDRIKVVDKDEDISGEIQEIRMFHVLIKHDNGN
LITYPNNLMLQKAVLKLAKEKAKPEEPKTTSRIYTRRNK

Sequences:

>Translated_199_residues
MNHWMHLEQISQYFTAGSIGYKVLMGVIILIAYRLLKKIANRAILNLAEAKGVNKARLSFIQRCFNVAFLFLFASLFAIV
TGIGYGDVSLFLSSIFAVLGVAFIAQWSILSNITASFLIFFVFPYRVGDRIKVVDKDEDISGEIQEIRMFHVLIKHDNGN
LITYPNNLMLQKAVLKLAKEKAKPEEPKTTSRIYTRRNK
>Mature_199_residues
MNHWMHLEQISQYFTAGSIGYKVLMGVIILIAYRLLKKIANRAILNLAEAKGVNKARLSFIQRCFNVAFLFLFASLFAIV
TGIGYGDVSLFLSSIFAVLGVAFIAQWSILSNITASFLIFFVFPYRVGDRIKVVDKDEDISGEIQEIRMFHVLIKHDNGN
LITYPNNLMLQKAVLKLAKEKAKPEEPKTTSRIYTRRNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22624; Mature: 22624

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHWMHLEQISQYFTAGSIGYKVLMGVIILIAYRLLKKIANRAILNLAEAKGVNKARLSF
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IQRCFNVAFLFLFASLFAIVTGIGYGDVSLFLSSIFAVLGVAFIAQWSILSNITASFLIF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVFPYRVGDRIKVVDKDEDISGEIQEIRMFHVLIKHDNGNLITYPNNLMLQKAVLKLAKE
HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHEEECCCCEEECCCHHHHHHHHHHHHHH
KAKPEEPKTTSRIYTRRNK
HCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MNHWMHLEQISQYFTAGSIGYKVLMGVIILIAYRLLKKIANRAILNLAEAKGVNKARLSF
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IQRCFNVAFLFLFASLFAIVTGIGYGDVSLFLSSIFAVLGVAFIAQWSILSNITASFLIF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVFPYRVGDRIKVVDKDEDISGEIQEIRMFHVLIKHDNGNLITYPNNLMLQKAVLKLAKE
HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHEEECCCCEEECCCHHHHHHHHHHHHHH
KAKPEEPKTTSRIYTRRNK
HCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA