| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156978261
Identifier: 156978261
GI number: 156978261
Start: 2140029
End: 2140361
Strand: Reverse
Name: 156978261
Synonym: VIBHAR_07067
Alternate gene names: NA
Gene position: 2140361-2140029 (Counterclockwise)
Preceding gene: 156978262
Following gene: 156978260
Centisome position: 97.11
GC content: 33.63
Gene sequence:
>333_bases ATGCGAAATTTATTTAATTTGTTATTAATATTGTCAATTTTCCCTATAAACTTTGCGTTGGCAAAAGATTCATATGCAGG AAAAATCCTTAGAATTCAGTCTGAAGGGATAGGAGACCCTTACAATACACTATATTTAGACCGAGATGTTATTAATTCTC CTTGTAAAAACAGCAACCAAAACAACCGCTTTACCATAGTAAACAATGCTCAACAGAGTACAGCTCTAGCAGCACTAATG GCTGATAAGAGTATTACAATCATGACCACAGGGGTTTGTAATGCGGCTGATATTGAAACACTAAATTACATAATGATTTA TGCTGACAAATAA
Upstream 100 bases:
>100_bases TGGTTTAACGATTCTAAAGATTGCTCTGAATCAAGCCATCAGCCATGGAAATGGCTAACTGGTTGGTACTTTGGTCCTAA GCTTGAGAATTGAAAACATT
Downstream 100 bases:
>100_bases TATTGAGAAATTTCAATGCGAATAATTACTTTTATCTTTCTTCTCTCAGCTAGCTTCTTTGCCTTTTCAAGCAGTCAAAT GGGAAAAGTTACACATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MRNLFNLLLILSIFPINFALAKDSYAGKILRIQSEGIGDPYNTLYLDRDVINSPCKNSNQNNRFTIVNNAQQSTALAALM ADKSITIMTTGVCNAADIETLNYIMIYADK
Sequences:
>Translated_110_residues MRNLFNLLLILSIFPINFALAKDSYAGKILRIQSEGIGDPYNTLYLDRDVINSPCKNSNQNNRFTIVNNAQQSTALAALM ADKSITIMTTGVCNAADIETLNYIMIYADK >Mature_110_residues MRNLFNLLLILSIFPINFALAKDSYAGKILRIQSEGIGDPYNTLYLDRDVINSPCKNSNQNNRFTIVNNAQQSTALAALM ADKSITIMTTGVCNAADIETLNYIMIYADK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12224; Mature: 12224
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLFNLLLILSIFPINFALAKDSYAGKILRIQSEGIGDPYNTLYLDRDVINSPCKNSNQ CCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEHHHHCCCCCCCCC NNRFTIVNNAQQSTALAALMADKSITIMTTGVCNAADIETLNYIMIYADK CCEEEEEECCCCHHHHEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MRNLFNLLLILSIFPINFALAKDSYAGKILRIQSEGIGDPYNTLYLDRDVINSPCKNSNQ CCHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEHHHHCCCCCCCCC NNRFTIVNNAQQSTALAALMADKSITIMTTGVCNAADIETLNYIMIYADK CCEEEEEECCCCHHHHEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA