| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978240
Identifier: 156978240
GI number: 156978240
Start: 2119656
End: 2121626
Strand: Reverse
Name: 156978240
Synonym: VIBHAR_07046
Alternate gene names: NA
Gene position: 2121626-2119656 (Counterclockwise)
Preceding gene: 156978241
Following gene: 156978237
Centisome position: 96.26
GC content: 47.03
Gene sequence:
>1971_bases ATGACCGCTGATGAAAAAATTCTGATTAAAGCGCCAAGAAGCCACAAGGATGGGCACCTTTTTGAGGTACACGAATCTTC TGCAGATTGGGTAGAACAATACCAACACTTCAAAGGGGTAACCAAGAGCATTTTAGAGTTGCTTAATCTGATCTCTTTAC GAGGATTCAGCAGCAAAGACGGTTTGGTATCGACAACAGAAATTGTTGAAGCAACCGACGGTCAACTGACCAGAGCCGCC TTACAACAGCGCTTACGTGCTGCAGTGAACATTGGTTTGTTTCATCAAACACCAGTACGTTTTGAAGAAGGCCTTGCTGG CAAAACCATGCTGCACAAGTTCGTCAACCCGAACCAGCTGATCTCAGCGTTAGGTGCCACCAGCTTAGTTACAGAAAAAG TTCGTCAGAGCGAAAAGCAAAAGCGTTCTAAGGCCTTGGCGCAAACTCAAGTGAACAAGCGCCTGTTGAATGAACATGGT TTGAATACCCCACCGATGATGAAGGATGAAGCGGATCAATTTGTCGTTTCTCCAACTAATTGGGCAGGGATCATCGACCA AGCCTTAGCGCCTCCACGCACTCGCAAGAGTTACCAGAAATCCATGGTTTCGATCTCTGGCACCAAAGCCGTGATTGAAA CACGATCGTCGAAAAACATCATGACAGTGGACGATCTGATGACCTTGTTTGCTCTGTTTACGCTGACTGTGCAATACCAC GATCATCACAAAGATCAGTACCACATGGACGCGGCGCATGTGCCCAACAAAACACCGTTGTACATTACGGATATCTTGTC ATTACGTGGCAAGAAAGACAGTGGCCCTGCACGAGATTCAATCCGCGACAGTATTGATCGTATCGAGTTTACTGATTTCC AATTGCACGAGCTCACTGGCCGCTGGCTGAGTGAAAACATGCCAGAAGGCTTCAAGAGTGATCGTTTCCGTTTTCTTGCT CGAACCATCACTGCATCGGAAGAAGCACCAACAGAAGGCGCTGACGGTGAAATTCGCATTAAGCCAAACCTTTACATCCT CGTGTGGGAACCGTCGTTCTATGAAGAACTGCTTACGCGTGATTATTTCTTCTTGTTCCCACCAGAAATTCTGAAACAAC ACACCTTGGTGTTCCAGTTGTACTCGTTCTTCCGTAGTCGCATGGTTCGTAGACACACCGATTGCATGTTATTGAGTGAG CTGAACCAAAAACTGGCCCGTAACATCGAATGGCGTCGTTTCTCAATGGATCTGATCCGTGAGTTGAAGCGCCTGTCTGA TGGTAAAGGGACGGAAGATCTTTTTGTTGTGAACTTATGGGGCTATCACTTAACGATCGAGACCATGATCGAAAACGGCA AAGTGATGGACTACCAAATCGACATCAAATGCGATGTGGAAGAAGTATTGCGTTACTCGCGTGCTCGTACGACCAACGCA GGAAAGCGTAATATGGCCCCTACGCTGCCAAACCCACTTCGTAATGAAATGGTTACTAGGCAGCAGCTAGACGAGCTCTC AGGCATCATAGACGGCGAATTTGAGCCTATTCAGCGTAAAGCTCCCTCTCCACGTGGTAATTTGGGCCGCCGAGTGAAGC AGAAAAAGCACCTAGTTGAGATCAATGCGGACGAGATAACCATTACTCTATCCAAATATACCTCTCCAGAGGCTCTAGAA CGCAGTATAACGGCTTTATCGGCGATGACAGGGCATTCCTATGCCTCAATCAAAGAAGAGTGTTCTGACTTCATAGACAA GCTCGATTTTTTGCGAGTAGGGGATGCCCCTCTGCCTTACGAGACGTTAAGCAAAACAGTCGAGCTGTTTAACAGCCAAA ACGATGTCAAACATCTCACCATTGAGCGTCTAATCGCAGGCTTAGCCGTTCGCCGAAAAGTGTGTCGCCAGATTTTTGAG GGACACATGGATGAGATGGTATTCAGAGCACTTGATGAAATGGCGATTTAA
Upstream 100 bases:
>100_bases AGTTATTTAAAAAACAAAGATTTTTTCTTTATTTATGATCTGTTTTTCTTTATTCTTCGGAACCATAGCAAAACTACGGC TAGTGTGATCTGGATCTAAA
Downstream 100 bases:
>100_bases TATGAATCAAGCGGATGCTTTTTGAGTAATAAGCATGGCTAATTGGTTCAGAATGTAACAATGAATTGCACTGATGGAAA TCAGACCTAACTCTTACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: RctB Protein
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MTADEKILIKAPRSHKDGHLFEVHESSADWVEQYQHFKGVTKSILELLNLISLRGFSSKDGLVSTTEIVEATDGQLTRAA LQQRLRAAVNIGLFHQTPVRFEEGLAGKTMLHKFVNPNQLISALGATSLVTEKVRQSEKQKRSKALAQTQVNKRLLNEHG LNTPPMMKDEADQFVVSPTNWAGIIDQALAPPRTRKSYQKSMVSISGTKAVIETRSSKNIMTVDDLMTLFALFTLTVQYH DHHKDQYHMDAAHVPNKTPLYITDILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHELTGRWLSENMPEGFKSDRFRFLA RTITASEEAPTEGADGEIRIKPNLYILVWEPSFYEELLTRDYFFLFPPEILKQHTLVFQLYSFFRSRMVRRHTDCMLLSE LNQKLARNIEWRRFSMDLIRELKRLSDGKGTEDLFVVNLWGYHLTIETMIENGKVMDYQIDIKCDVEEVLRYSRARTTNA GKRNMAPTLPNPLRNEMVTRQQLDELSGIIDGEFEPIQRKAPSPRGNLGRRVKQKKHLVEINADEITITLSKYTSPEALE RSITALSAMTGHSYASIKEECSDFIDKLDFLRVGDAPLPYETLSKTVELFNSQNDVKHLTIERLIAGLAVRRKVCRQIFE GHMDEMVFRALDEMAI
Sequences:
>Translated_656_residues MTADEKILIKAPRSHKDGHLFEVHESSADWVEQYQHFKGVTKSILELLNLISLRGFSSKDGLVSTTEIVEATDGQLTRAA LQQRLRAAVNIGLFHQTPVRFEEGLAGKTMLHKFVNPNQLISALGATSLVTEKVRQSEKQKRSKALAQTQVNKRLLNEHG LNTPPMMKDEADQFVVSPTNWAGIIDQALAPPRTRKSYQKSMVSISGTKAVIETRSSKNIMTVDDLMTLFALFTLTVQYH DHHKDQYHMDAAHVPNKTPLYITDILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHELTGRWLSENMPEGFKSDRFRFLA RTITASEEAPTEGADGEIRIKPNLYILVWEPSFYEELLTRDYFFLFPPEILKQHTLVFQLYSFFRSRMVRRHTDCMLLSE LNQKLARNIEWRRFSMDLIRELKRLSDGKGTEDLFVVNLWGYHLTIETMIENGKVMDYQIDIKCDVEEVLRYSRARTTNA GKRNMAPTLPNPLRNEMVTRQQLDELSGIIDGEFEPIQRKAPSPRGNLGRRVKQKKHLVEINADEITITLSKYTSPEALE RSITALSAMTGHSYASIKEECSDFIDKLDFLRVGDAPLPYETLSKTVELFNSQNDVKHLTIERLIAGLAVRRKVCRQIFE GHMDEMVFRALDEMAI >Mature_655_residues TADEKILIKAPRSHKDGHLFEVHESSADWVEQYQHFKGVTKSILELLNLISLRGFSSKDGLVSTTEIVEATDGQLTRAAL QQRLRAAVNIGLFHQTPVRFEEGLAGKTMLHKFVNPNQLISALGATSLVTEKVRQSEKQKRSKALAQTQVNKRLLNEHGL NTPPMMKDEADQFVVSPTNWAGIIDQALAPPRTRKSYQKSMVSISGTKAVIETRSSKNIMTVDDLMTLFALFTLTVQYHD HHKDQYHMDAAHVPNKTPLYITDILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHELTGRWLSENMPEGFKSDRFRFLAR TITASEEAPTEGADGEIRIKPNLYILVWEPSFYEELLTRDYFFLFPPEILKQHTLVFQLYSFFRSRMVRRHTDCMLLSEL NQKLARNIEWRRFSMDLIRELKRLSDGKGTEDLFVVNLWGYHLTIETMIENGKVMDYQIDIKCDVEEVLRYSRARTTNAG KRNMAPTLPNPLRNEMVTRQQLDELSGIIDGEFEPIQRKAPSPRGNLGRRVKQKKHLVEINADEITITLSKYTSPEALER SITALSAMTGHSYASIKEECSDFIDKLDFLRVGDAPLPYETLSKTVELFNSQNDVKHLTIERLIAGLAVRRKVCRQIFEG HMDEMVFRALDEMAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75145; Mature: 75014
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADEKILIKAPRSHKDGHLFEVHESSADWVEQYQHFKGVTKSILELLNLISLRGFSSKD CCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GLVSTTEIVEATDGQLTRAALQQRLRAAVNIGLFHQTPVRFEEGLAGKTMLHKFVNPNQL CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHCCHHHH ISALGATSLVTEKVRQSEKQKRSKALAQTQVNKRLLNEHGLNTPPMMKDEADQFVVSPTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCC WAGIIDQALAPPRTRKSYQKSMVSISGTKAVIETRSSKNIMTVDDLMTLFALFTLTVQYH HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHH DHHKDQYHMDAAHVPNKTPLYITDILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHELTG HCCCCHHCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH RWLSENMPEGFKSDRFRFLARTITASEEAPTEGADGEIRIKPNLYILVWEPSFYEELLTR HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHC DYFFLFPPEILKQHTLVFQLYSFFRSRMVRRHTDCMLLSELNQKLARNIEWRRFSMDLIR CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ELKRLSDGKGTEDLFVVNLWGYHLTIETMIENGKVMDYQIDIKCDVEEVLRYSRARTTNA HHHHHCCCCCCCCEEEEEECCCEEEEEHHHCCCEEEEEEEEEECCHHHHHHHHHHCCCCC GKRNMAPTLPNPLRNEMVTRQQLDELSGIIDGEFEPIQRKAPSPRGNLGRRVKQKKHLVE CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHEEE INADEITITLSKYTSPEALERSITALSAMTGHSYASIKEECSDFIDKLDFLRVGDAPLPY ECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH ETLSKTVELFNSQNDVKHLTIERLIAGLAVRRKVCRQIFEGHMDEMVFRALDEMAI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure TADEKILIKAPRSHKDGHLFEVHESSADWVEQYQHFKGVTKSILELLNLISLRGFSSKD CCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GLVSTTEIVEATDGQLTRAALQQRLRAAVNIGLFHQTPVRFEEGLAGKTMLHKFVNPNQL CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHCCHHHH ISALGATSLVTEKVRQSEKQKRSKALAQTQVNKRLLNEHGLNTPPMMKDEADQFVVSPTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCC WAGIIDQALAPPRTRKSYQKSMVSISGTKAVIETRSSKNIMTVDDLMTLFALFTLTVQYH HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHH DHHKDQYHMDAAHVPNKTPLYITDILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHELTG HCCCCHHCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH RWLSENMPEGFKSDRFRFLARTITASEEAPTEGADGEIRIKPNLYILVWEPSFYEELLTR HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHC DYFFLFPPEILKQHTLVFQLYSFFRSRMVRRHTDCMLLSELNQKLARNIEWRRFSMDLIR CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ELKRLSDGKGTEDLFVVNLWGYHLTIETMIENGKVMDYQIDIKCDVEEVLRYSRARTTNA HHHHHCCCCCCCCEEEEEECCCEEEEEHHHCCCEEEEEEEEEECCHHHHHHHHHHCCCCC GKRNMAPTLPNPLRNEMVTRQQLDELSGIIDGEFEPIQRKAPSPRGNLGRRVKQKKHLVE CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHEEE INADEITITLSKYTSPEALERSITALSAMTGHSYASIKEECSDFIDKLDFLRVGDAPLPY ECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH ETLSKTVELFNSQNDVKHLTIERLIAGLAVRRKVCRQIFEGHMDEMVFRALDEMAI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA