| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978171
Identifier: 156978171
GI number: 156978171
Start: 2065767
End: 2066330
Strand: Direct
Name: 156978171
Synonym: VIBHAR_06976
Alternate gene names: NA
Gene position: 2065767-2066330 (Clockwise)
Preceding gene: 156978169
Following gene: 156978172
Centisome position: 93.73
GC content: 42.38
Gene sequence:
>564_bases ATGGAGCGCTTACGATTCTCAAGCCTGCATCTTCAAGTTGATTCGGTATACAACTCAACAGAGTTGCGCACTCTCTATAA CCAACTTTCGTCATACGAAGAGAAAGGCAATCCGAAAGTTAGTTATCTCTACAATGTTCAAGACATCAGCAAGATAACTG TCATTAATCCGAATACACTCGAAATCCTTGAAGTGCCCTGCACTCATCCTAATGTTGAAGCTGGATTATCGCTTCACGTT TACAAAGCAAACAAAAAATCACTAGACAAGCGGTCTCCTTGTGTCTTGACTCGCCCATCCCCTTCATTGAAGGACAAACC CGAGTCTTCAAATAGTGAAAAAGAGTGTGGTGATACCGGACAAAAAACAAATCACACCATCGCAATCGCTGGAAGTCAGT CAGCTAGTGACTTAGAGGATATAGTCGATTCACAAATCGGTCGAATTGCAAATGATCACTCAGAGAAGCAGCAAGCTCCT AAACACAAAGCAAAAGAGCCTAGCAGCAACCCTAAAAAGGTGCGTAAGCCATCCAAAATTCGTCAAGGAAAAAAGAATGA CTGA
Upstream 100 bases:
>100_bases TTGCCATTCTTGATTAGTGTGTCGTTTTCCCATTTCAAATCTCCTCATGGTTGGAGACTTGATCTTATTCTTCGCGCTAG GCGATTAGAATGCGGGTTTT
Downstream 100 bases:
>100_bases AATGAAGCTAAAAACAGAAAGTGAGCAATTTAGTGAAGGGGTATGTGAGCACCTGGCCTTTGAAGATGCTCAAGAAGCCA TCCAAAGACTGCACAGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTLEILEVPCTHPNVEAGLSLHV YKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTGQKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAP KHKAKEPSSNPKKVRKPSKIRQGKKND
Sequences:
>Translated_187_residues MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTLEILEVPCTHPNVEAGLSLHV YKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTGQKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAP KHKAKEPSSNPKKVRKPSKIRQGKKND >Mature_187_residues MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTLEILEVPCTHPNVEAGLSLHV YKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTGQKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAP KHKAKEPSSNPKKVRKPSKIRQGKKND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20868; Mature: 20868
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTL CCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCE EILEVPCTHPNVEAGLSLHVYKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTG EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCC QKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAPKHKAKEPSSNPKKVRKPSKI CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCHHHHCCCHHH RQGKKND HCCCCCC >Mature Secondary Structure MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTL CCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCE EILEVPCTHPNVEAGLSLHVYKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTG EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCC QKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAPKHKAKEPSSNPKKVRKPSKI CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCHHHHCCCHHH RQGKKND HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA