Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978171

Identifier: 156978171

GI number: 156978171

Start: 2065767

End: 2066330

Strand: Direct

Name: 156978171

Synonym: VIBHAR_06976

Alternate gene names: NA

Gene position: 2065767-2066330 (Clockwise)

Preceding gene: 156978169

Following gene: 156978172

Centisome position: 93.73

GC content: 42.38

Gene sequence:

>564_bases
ATGGAGCGCTTACGATTCTCAAGCCTGCATCTTCAAGTTGATTCGGTATACAACTCAACAGAGTTGCGCACTCTCTATAA
CCAACTTTCGTCATACGAAGAGAAAGGCAATCCGAAAGTTAGTTATCTCTACAATGTTCAAGACATCAGCAAGATAACTG
TCATTAATCCGAATACACTCGAAATCCTTGAAGTGCCCTGCACTCATCCTAATGTTGAAGCTGGATTATCGCTTCACGTT
TACAAAGCAAACAAAAAATCACTAGACAAGCGGTCTCCTTGTGTCTTGACTCGCCCATCCCCTTCATTGAAGGACAAACC
CGAGTCTTCAAATAGTGAAAAAGAGTGTGGTGATACCGGACAAAAAACAAATCACACCATCGCAATCGCTGGAAGTCAGT
CAGCTAGTGACTTAGAGGATATAGTCGATTCACAAATCGGTCGAATTGCAAATGATCACTCAGAGAAGCAGCAAGCTCCT
AAACACAAAGCAAAAGAGCCTAGCAGCAACCCTAAAAAGGTGCGTAAGCCATCCAAAATTCGTCAAGGAAAAAAGAATGA
CTGA

Upstream 100 bases:

>100_bases
TTGCCATTCTTGATTAGTGTGTCGTTTTCCCATTTCAAATCTCCTCATGGTTGGAGACTTGATCTTATTCTTCGCGCTAG
GCGATTAGAATGCGGGTTTT

Downstream 100 bases:

>100_bases
AATGAAGCTAAAAACAGAAAGTGAGCAATTTAGTGAAGGGGTATGTGAGCACCTGGCCTTTGAAGATGCTCAAGAAGCCA
TCCAAAGACTGCACAGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTLEILEVPCTHPNVEAGLSLHV
YKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTGQKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAP
KHKAKEPSSNPKKVRKPSKIRQGKKND

Sequences:

>Translated_187_residues
MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTLEILEVPCTHPNVEAGLSLHV
YKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTGQKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAP
KHKAKEPSSNPKKVRKPSKIRQGKKND
>Mature_187_residues
MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTLEILEVPCTHPNVEAGLSLHV
YKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTGQKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAP
KHKAKEPSSNPKKVRKPSKIRQGKKND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20868; Mature: 20868

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTL
CCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCE
EILEVPCTHPNVEAGLSLHVYKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTG
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCC
QKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAPKHKAKEPSSNPKKVRKPSKI
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCHHHHCCCHHH
RQGKKND
HCCCCCC
>Mature Secondary Structure
MERLRFSSLHLQVDSVYNSTELRTLYNQLSSYEEKGNPKVSYLYNVQDISKITVINPNTL
CCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCE
EILEVPCTHPNVEAGLSLHVYKANKKSLDKRSPCVLTRPSPSLKDKPESSNSEKECGDTG
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCC
QKTNHTIAIAGSQSASDLEDIVDSQIGRIANDHSEKQQAPKHKAKEPSSNPKKVRKPSKI
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCHHHHCCCHHH
RQGKKND
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA