| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978152
Identifier: 156978152
GI number: 156978152
Start: 2050942
End: 2051796
Strand: Reverse
Name: 156978152
Synonym: VIBHAR_06957
Alternate gene names: NA
Gene position: 2051796-2050942 (Counterclockwise)
Preceding gene: 156978153
Following gene: 156978151
Centisome position: 93.09
GC content: 48.65
Gene sequence:
>855_bases ATGAGTGAGAAAATTTACTTCAATACTTCGCAGAAATTCAGTGTTAAACGCAGCTTGGTCAACATCAGTACCCGCCTGCA TCACACGTTGGCGCCGTCACATGCAAAAAAGACCGCGCGTAAACTGTTGCTTACTCCCGCTCGTACTCAGCCAAAAAATG TCGAGCCACAGGGGCTTATCAAAAGCGAAGTGCAAGGTCATGCCGGTGCAATTAAAACCTATCAACTTGGTAGTGGCCCA GTATGGGTTTTGACTCACGGCTGGTCAGGGACTGCGAGTCAGTTCTACCCGTTGATGGAGCATATTGCGGCATCGGGTTA CACCGCATTAGCGTACGATCATCCTGCTCATGGTGAGAGTGAGGGACAATACGGACATATTCCAGCGTTTGTATGCGGTC TTGAAGATGTATTAGATTCTGTCGATGAGGTTGCAGGTTTGGTGGGGCACAGCATGGGTACCGCTTCAGCGCTAGAGTGC CGCCACAGTAAATTAGAAAACAAGCCTTTGCTGTTGATCGCGCCAGTGCTTAACTACGTTGAAAACCTATTTGGCAGCAT TGCGCGTTCGGGTTACTCAATGAAGTTATTCAAAGCGGTGGTTTCGGAAGTGGAAGACCAGTTTGGCTACCCATTGCAAT CCATTGACCCAGAGAAACGCCTAGCTGAGCGAGAAGCAAAAACTATTATTGTTCATGATATGCAGGATAAGTTCACCAAA CACAGTGTGTCTGCTAAAGCGGCGGACGAGATTGAACGAGTGGAACTGGTTACCACGCAGGGCCAAGGCCATGGCCGCGT GATGAAGTGTGATGAGGTATTCCAGAGTTTCGACCGTTTAATTGAAGTGAGCTGA
Upstream 100 bases:
>100_bases AAAGATTCAAAATGAAGAGCGACAACGAGCGCTCTTTCTTATCAGTATAAAAAGCACGACCGTTCTATTTTGTGCAAGGC TGATAGTTAAGGAAACGATC
Downstream 100 bases:
>100_bases TTATGAAAGAGTGTTGAATAAATTCTGTTAGAACAACAAAGGACAGCCGAAGCTGTCCTTTTCTTGTTTTAACAATATTC AAAGCGAGTGATGTTGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Or Acyltransferase; Esterase/Lipase; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Fold Protein
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSEKIYFNTSQKFSVKRSLVNISTRLHHTLAPSHAKKTARKLLLTPARTQPKNVEPQGLIKSEVQGHAGAIKTYQLGSGP VWVLTHGWSGTASQFYPLMEHIAASGYTALAYDHPAHGESEGQYGHIPAFVCGLEDVLDSVDEVAGLVGHSMGTASALEC RHSKLENKPLLLIAPVLNYVENLFGSIARSGYSMKLFKAVVSEVEDQFGYPLQSIDPEKRLAEREAKTIIVHDMQDKFTK HSVSAKAADEIERVELVTTQGQGHGRVMKCDEVFQSFDRLIEVS
Sequences:
>Translated_284_residues MSEKIYFNTSQKFSVKRSLVNISTRLHHTLAPSHAKKTARKLLLTPARTQPKNVEPQGLIKSEVQGHAGAIKTYQLGSGP VWVLTHGWSGTASQFYPLMEHIAASGYTALAYDHPAHGESEGQYGHIPAFVCGLEDVLDSVDEVAGLVGHSMGTASALEC RHSKLENKPLLLIAPVLNYVENLFGSIARSGYSMKLFKAVVSEVEDQFGYPLQSIDPEKRLAEREAKTIIVHDMQDKFTK HSVSAKAADEIERVELVTTQGQGHGRVMKCDEVFQSFDRLIEVS >Mature_283_residues SEKIYFNTSQKFSVKRSLVNISTRLHHTLAPSHAKKTARKLLLTPARTQPKNVEPQGLIKSEVQGHAGAIKTYQLGSGPV WVLTHGWSGTASQFYPLMEHIAASGYTALAYDHPAHGESEGQYGHIPAFVCGLEDVLDSVDEVAGLVGHSMGTASALECR HSKLENKPLLLIAPVLNYVENLFGSIARSGYSMKLFKAVVSEVEDQFGYPLQSIDPEKRLAEREAKTIIVHDMQDKFTKH SVSAKAADEIERVELVTTQGQGHGRVMKCDEVFQSFDRLIEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31285; Mature: 31154
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKIYFNTSQKFSVKRSLVNISTRLHHTLAPSHAKKTARKLLLTPARTQPKNVEPQGLI CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH KSEVQGHAGAIKTYQLGSGPVWVLTHGWSGTASQFYPLMEHIAASGYTALAYDHPAHGES HHHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC EGQYGHIPAFVCGLEDVLDSVDEVAGLVGHSMGTASALECRHSKLENKPLLLIAPVLNYV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHH ENLFGSIARSGYSMKLFKAVVSEVEDQFGYPLQSIDPEKRLAEREAKTIIVHDMQDKFTK HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEECHHHHHHH HSVSAKAADEIERVELVTTQGQGHGRVMKCDEVFQSFDRLIEVS HHCCHHHHHHHHHEEEEEECCCCCCCEEEHHHHHHHHHHHHCCC >Mature Secondary Structure SEKIYFNTSQKFSVKRSLVNISTRLHHTLAPSHAKKTARKLLLTPARTQPKNVEPQGLI CCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH KSEVQGHAGAIKTYQLGSGPVWVLTHGWSGTASQFYPLMEHIAASGYTALAYDHPAHGES HHHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC EGQYGHIPAFVCGLEDVLDSVDEVAGLVGHSMGTASALECRHSKLENKPLLLIAPVLNYV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHH ENLFGSIARSGYSMKLFKAVVSEVEDQFGYPLQSIDPEKRLAEREAKTIIVHDMQDKFTK HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEECHHHHHHH HSVSAKAADEIERVELVTTQGQGHGRVMKCDEVFQSFDRLIEVS HHCCHHHHHHHHHEEEEEECCCCCCCEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA