| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is yeiG [H]
Identifier: 156978121
GI number: 156978121
Start: 2022404
End: 2023243
Strand: Direct
Name: yeiG [H]
Synonym: VIBHAR_06926
Alternate gene names: 156978121
Gene position: 2022404-2023243 (Clockwise)
Preceding gene: 156978120
Following gene: 156978122
Centisome position: 91.76
GC content: 48.1
Gene sequence:
>840_bases ATGACCATTGAAAGCCTAAGCCAAGCCAAAGTATTCGGTGGTTGGCATAAACAGTACACTCACGAATCTCGCGCTTTGAA CTGCAACATGCGCTTCGCGATCTTCTTGCCACCTAACGCGACCAAATCAAACCCAGTGCCTGTGGTTTACTGGTTGTCTG GCTTGACATGTACCGATGAGAACTTCATGCAGAAAGCCGGTGCGTTTCGCATGGCGGCTGAGTTAGGTATCGCCATTGTG GCACCGGATACCAGCCCACGTGGTGACGACGTTGCAGACGACGAAAACTACGATCTGGGTAAAGGCGCAGGTTTCTACCT AAACGCCACTCAAGAGCCATGGTCACGCCACTACCATATGTACGATTACATCACCAAAGAATTGCCTGCGATCATTGAAA ACAACTTCCCTGTTTCAGATGTTAAATCGATTTCGGGTCACAGCATGGGTGGTCACGGTGCAATCACCATTGGTCTGAAA AATTCAGATCAGTACCGTTCAATTTCAGCGTTCAGCCCAATCAGTAACCCAATGCAATGTCCTTGGGGCCAAAAAGCGTT TACCGCTTACCTAGGCACTGATATCGAAAGCTGGAAGCAGTACGACGCAAGCGAGTTGCTAAAGCAAGCAAAATCACCAT TGCCAATCTTGGTAGATCAAGGTGATGCCGATAACTTCCTTGCTGAGCAATTAAAACCTGATGTGTTACTGGCGGCAGCA AAAGCCCATGATTCTGAAGTCGAACTGCGCATGCAGCCGGGTTACGACCACAGCTACTTCTTTATCTCGAGCTTTATCGC TGATCACTTGAACTTCCACGCTAAGTACTTATTTGCCTAA
Upstream 100 bases:
>100_bases TTTAACGGTCTTGTCCGCCGTTAAAAATCATTGTTTTAAATATTCACTGTTTTAATTAAAGATTACTTTAACTAAACATT GTTTTATCGAGAGATTATCC
Downstream 100 bases:
>100_bases CGCCAATTTTAACGCCGCAAGCAAATAGAAGAGCGCGGAAAACCAAACGGTTTAATAATCTTCTCTATACAAAGCCATCC AATTATTGGGTGGCTTTTTG
Product: esterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTIESLSQAKVFGGWHKQYTHESRALNCNMRFAIFLPPNATKSNPVPVVYWLSGLTCTDENFMQKAGAFRMAAELGIAIV APDTSPRGDDVADDENYDLGKGAGFYLNATQEPWSRHYHMYDYITKELPAIIENNFPVSDVKSISGHSMGGHGAITIGLK NSDQYRSISAFSPISNPMQCPWGQKAFTAYLGTDIESWKQYDASELLKQAKSPLPILVDQGDADNFLAEQLKPDVLLAAA KAHDSEVELRMQPGYDHSYFFISSFIADHLNFHAKYLFA
Sequences:
>Translated_279_residues MTIESLSQAKVFGGWHKQYTHESRALNCNMRFAIFLPPNATKSNPVPVVYWLSGLTCTDENFMQKAGAFRMAAELGIAIV APDTSPRGDDVADDENYDLGKGAGFYLNATQEPWSRHYHMYDYITKELPAIIENNFPVSDVKSISGHSMGGHGAITIGLK NSDQYRSISAFSPISNPMQCPWGQKAFTAYLGTDIESWKQYDASELLKQAKSPLPILVDQGDADNFLAEQLKPDVLLAAA KAHDSEVELRMQPGYDHSYFFISSFIADHLNFHAKYLFA >Mature_278_residues TIESLSQAKVFGGWHKQYTHESRALNCNMRFAIFLPPNATKSNPVPVVYWLSGLTCTDENFMQKAGAFRMAAELGIAIVA PDTSPRGDDVADDENYDLGKGAGFYLNATQEPWSRHYHMYDYITKELPAIIENNFPVSDVKSISGHSMGGHGAITIGLKN SDQYRSISAFSPISNPMQCPWGQKAFTAYLGTDIESWKQYDASELLKQAKSPLPILVDQGDADNFLAEQLKPDVLLAAAK AHDSEVELRMQPGYDHSYFFISSFIADHLNFHAKYLFA
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=283, Percent_Identity=52.6501766784452, Blast_Score=314, Evalue=4e-86, Organism=Escherichia coli, GI1788477, Length=278, Percent_Identity=57.5539568345324, Blast_Score=335, Evalue=3e-93, Organism=Escherichia coli, GI1786551, Length=275, Percent_Identity=51.2727272727273, Blast_Score=305, Evalue=3e-84, Organism=Caenorhabditis elegans, GI17510185, Length=282, Percent_Identity=51.063829787234, Blast_Score=273, Evalue=6e-74, Organism=Saccharomyces cerevisiae, GI6322393, Length=296, Percent_Identity=44.9324324324324, Blast_Score=238, Evalue=7e-64, Organism=Drosophila melanogaster, GI45551932, Length=284, Percent_Identity=51.056338028169, Blast_Score=299, Evalue=2e-81, Organism=Drosophila melanogaster, GI24648347, Length=284, Percent_Identity=51.056338028169, Blast_Score=298, Evalue=3e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31058; Mature: 30927
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIESLSQAKVFGGWHKQYTHESRALNCNMRFAIFLPPNATKSNPVPVVYWLSGLTCTDE CCCCHHHHHHHHCCHHHHHCCCCCEEECCEEEEEEECCCCCCCCCCEEEEEECCCEECCH NFMQKAGAFRMAAELGIAIVAPDTSPRGDDVADDENYDLGKGAGFYLNATQEPWSRHYHM HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCHH YDYITKELPAIIENNFPVSDVKSISGHSMGGHGAITIGLKNSDQYRSISAFSPISNPMQC HHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCC PWGQKAFTAYLGTDIESWKQYDASELLKQAKSPLPILVDQGDADNFLAEQLKPDVLLAAA CCCCHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCEEEEEE KAHDSEVELRMQPGYDHSYFFISSFIADHLNFHAKYLFA CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure TIESLSQAKVFGGWHKQYTHESRALNCNMRFAIFLPPNATKSNPVPVVYWLSGLTCTDE CCCHHHHHHHHCCHHHHHCCCCCEEECCEEEEEEECCCCCCCCCCEEEEEECCCEECCH NFMQKAGAFRMAAELGIAIVAPDTSPRGDDVADDENYDLGKGAGFYLNATQEPWSRHYHM HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCHH YDYITKELPAIIENNFPVSDVKSISGHSMGGHGAITIGLKNSDQYRSISAFSPISNPMQC HHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCC PWGQKAFTAYLGTDIESWKQYDASELLKQAKSPLPILVDQGDADNFLAEQLKPDVLLAAA CCCCHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCEEEEEE KAHDSEVELRMQPGYDHSYFFISSFIADHLNFHAKYLFA CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA