| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978117
Identifier: 156978117
GI number: 156978117
Start: 2019066
End: 2019578
Strand: Reverse
Name: 156978117
Synonym: VIBHAR_06922
Alternate gene names: NA
Gene position: 2019578-2019066 (Counterclockwise)
Preceding gene: 156978118
Following gene: 156978116
Centisome position: 91.63
GC content: 44.44
Gene sequence:
>513_bases ATGCGCTTTGAATACATACTTGATGATGCAGTCACCCCAGCTCTCGATGCAAAGCTAAGGCATTTGCTTTCTACTTGCTT TACCAAAGAGCAAGATAAAATCTTTCAGACTCAACGATACTTCCGTGAAATGCCACGACATCGCTACCTTATTTGGGATG GCGAAATCCTTGCAGCGCATATTGCTGCGCACGAGAAGCAAGTGATGATAGATGATCAATCTTTTCCCATTAGCGGTATT GCGGAAGTCTGTGTACAGCCTAACTTTCGTGGGAAAGGACTGGTGAAAACATTGCTCAATTCGGTGCATCAGGATGCTAT AGAGCGAGGAGATGCCTTTTCCATATTATTTGGGCGAACGCACGTCTATCAGTCCAGCGGTTATCAGCCGACAGATAACT TGCACATGGAAATTCAACCCAATCAATGGGCTAGTATCAGTGATGCTATGGTACGTTCTCTGAATATCACTTGGCCGCAG CAAGTTGTACATTTAGTCGGCTATCCTTTTTAA
Upstream 100 bases:
>100_bases AAAGCGCAGCTCAGTCTGCGCTTTTTTTATTTGCGCTGTATCCCAGTAAGTGGTTTTTCAAAGGTTTACTTTTAATCATG GGAAATCAATGAGGTCAATC
Downstream 100 bases:
>100_bases ACAGGTTTTCTCTGCATTTAACTTTGTGTGAGAATACGCATACATAGAATTCCACAGGAACCACATTCATGGCGAATTGG GAAGGCGTGAGCGAATTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAHIAAHEKQVMIDDQSFPISGI AEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRTHVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQ QVVHLVGYPF
Sequences:
>Translated_170_residues MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAHIAAHEKQVMIDDQSFPISGI AEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRTHVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQ QVVHLVGYPF >Mature_170_residues MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAHIAAHEKQVMIDDQSFPISGI AEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRTHVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQ QVVHLVGYPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19618; Mature: 19618
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAH CCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH IAAHEKQVMIDDQSFPISGIAEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRT HHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHH HVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQQVVHLVGYPF EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAH CCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH IAAHEKQVMIDDQSFPISGIAEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRT HHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHH HVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQQVVHLVGYPF EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA