Click here to switch to the map view.

The map label for this gene is 156978094

Identifier: 156978094

GI number: 156978094

Start: 1997863

End: 1998339

Strand: Reverse

Name: 156978094

Synonym: VIBHAR_06898

Alternate gene names: NA

Gene position: 1998339-1997863 (Counterclockwise)

Preceding gene: 156978095

Following gene: 156978092

Centisome position: 90.67

GC content: 44.86

Gene sequence:

>477_bases
ATGTTGTTTAATAATCACTCAATTTTCGGGCAATTTGGTTTTCTGTCCGAATTACGCAACAAAGCCCAAGAGACACTCTA
TTTTAGCGGTGACAGTGCATACGATAGCCACTTTGCACAAATCGCTCAGCGTTGCGGCCCGATTGATATCGCCTGTTTGG
AAGTCGCGGCAGATGTGAAAGGCAACCAAGGTTATCCGGTTGAGAACTGGGGACACATGCAAGCGCATCACACGGTACGA
GCATTCAAAGATCTGCAAGCTAAGAAGTTGCTACCTGTGCACTGGGCAACGTATGAGTTGTTTACGCACAAATGGGATGA
GCCCATTGAGGACTTGATTGAACATTGCCAAGCTGATCACATTGAACTGATAACCCCTATGGCGGGAGAGAGTTTTTACG
TGGCAAAAGAATATAAAAATAAGCCTTGGTGGCAAGCCAATAAATTATGTGAGCAAGCTAGAAACATACGGGTATAA

Upstream 100 bases:

>100_bases
AAATTAAGCCTGAGGAACTACAACGCTCAAGTTGGTGAGACTTACGCCATGATTAAAGCGCTGAACAAGCTTACAGGGCT
TGGTATGCCTGAAACTCAGC

Downstream 100 bases:

>100_bases
TATGACGGCGCTTCAATAATACCTCGGTTAATTTAACTAACTTTCTTGCTCCTTATAACAAGATTTTTACTGGTCATCGA
ATCGATAAATTACCAGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLFNNHSIFGQFGFLSELRNKAQETLYFSGDSAYDSHFAQIAQRCGPIDIACLEVAADVKGNQGYPVENWGHMQAHHTVR
AFKDLQAKKLLPVHWATYELFTHKWDEPIEDLIEHCQADHIELITPMAGESFYVAKEYKNKPWWQANKLCEQARNIRV

Sequences:

>Translated_158_residues
MLFNNHSIFGQFGFLSELRNKAQETLYFSGDSAYDSHFAQIAQRCGPIDIACLEVAADVKGNQGYPVENWGHMQAHHTVR
AFKDLQAKKLLPVHWATYELFTHKWDEPIEDLIEHCQADHIELITPMAGESFYVAKEYKNKPWWQANKLCEQARNIRV
>Mature_158_residues
MLFNNHSIFGQFGFLSELRNKAQETLYFSGDSAYDSHFAQIAQRCGPIDIACLEVAADVKGNQGYPVENWGHMQAHHTVR
AFKDLQAKKLLPVHWATYELFTHKWDEPIEDLIEHCQADHIELITPMAGESFYVAKEYKNKPWWQANKLCEQARNIRV

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18295; Mature: 18295

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFNNHSIFGQFGFLSELRNKAQETLYFSGDSAYDSHFAQIAQRCGPIDIACLEVAADVK
CCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC
GNQGYPVENWGHMQAHHTVRAFKDLQAKKLLPVHWATYELFTHKWDEPIEDLIEHCQADH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
IELITPMAGESFYVAKEYKNKPWWQANKLCEQARNIRV
EEEECCCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLFNNHSIFGQFGFLSELRNKAQETLYFSGDSAYDSHFAQIAQRCGPIDIACLEVAADVK
CCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC
GNQGYPVENWGHMQAHHTVRAFKDLQAKKLLPVHWATYELFTHKWDEPIEDLIEHCQADH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
IELITPMAGESFYVAKEYKNKPWWQANKLCEQARNIRV
EEEECCCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]